Charles E. Schmidt
College of Science

Link to Charles E. Schmidt College of Science Programs

Biological Sciences

Undergraduate Courses /link to graduate courses

* Prerequisite courses must be completed with grades of "C-" or better.

* Vascular Plant Anatomy (BOT 3223) 2 credits
Prerequisite: One year of general biology, including general botany; Corequisite: BOT 3223L
A study of the origin, structure and function of the principal cells, tissues and organs of the vascular plants with emphasis on the angiosperms. Lecture and laboratory.

Vascular Plants Lab (BOT 3223L) 2 credits
Corequisite: BOT 3223
A laboratory examination of the major taxa of vascular plants.

* Principles of Plant Physiology (BOT 4503) 2 credits
Prerequisites: BSC 1010, BSC 1010L
This course covers aspects of plant life involving growth, development, reproduction and interaction with the environment, with underlying principles in cell biology, biochemistry, biophysics, genetics, physiology, evolution and ecology.

* Plant Physiology Lab (BOT 4503L) 2 credits
Prerequisites: BSC 1010, BSC 1010L
This course uses a series of lab exercises to study the principles of plant physiology, focusing on hands-on lab experience and learning of experimental design, research tools and methodology and scientific writing skills.

* Plant Cell Biology (BOT 4542) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L
This course covers the cell biological aspects established in plant anatomy, plant physiology, plant growth and development, plant taxonomy, plant biochemistry and plant molecular biology. Emphasis is on experimental approaches used to understand these processes at the molecular level. A discussion of model organisms and cell types is included.

* Plant Biotechnology (BOT 4734C) 3 credits
Prerequisite: BSC 1010 or BSC 1010L or permission of instructor
Course provides materials to help students gain current knowledge of structure and function of plant genomes, genes, and gene products; to learn hands-on techniques of DNA-transfer-based plant biotechnology; and to train for a professional career in plant/agriculture biotechnology research.

* Prerequisite courses must be completed with grades of "C-" or better.

Life Science (BSC 1005) 2 credits
This course applies the scientific method to critically examine and explain the natural world including but not limited to cells, organisms, genetics, evolution, ecology and behavior. This is a General Education course.

* Life Science Lab (BSC 1005L) 1 credit
Prerequisite or Corequisite: BSC 1005
Laboratory investigation of biological knowledge relevant to social, economic, environmental and philosophical problems. This is a General Education course.

* RI: Life Science Lab (BSC 1005L) 1 credit
Prerequisite or Corequisite: BSC 1005
Laboratory investigation of biological knowledge relevant to social, economic, environmental and philosophical problems. This is a General Education course. This course is research intensive (RI).

Biological Principles (BSC 1010) 3 credits
Corequisite: BSC 1010L
In this course, students will apply the scientific method to critically examine and explain the natural world. This course will cover molecular biology, cellular biology, genetics, metabolism and replication. This is a General Education course. 

Biological Principles Lab (BSC 1010L) 1 credit
Corequisite: BSC 1010
An introduction to general laboratory procedures to demonstrate the basic principle of biology. This is a General Education course.

Biodiversity (BSC 1011) 3 credits
Corequisite: BSC 1011L
An introduction and survey of organismal diversity, including fungi, protists, plants and animals. Phylogenetic relationships, evolutionary mechanisms, and ecological processes are emphasized. Origins of life and human evolution. This is a General Education course.

Biodiversity Lab (BSC 1011L) 1 credit
Corequisite: BSC 1011
A survey of the diversity of eukaryotic organisms. This is a General Education course.

Introduction to Biology at Florida Atlantic University (BSC 1019) 0 credits
Prerequisite: For Biology majors
This course provides students with an introduction to the Biology major at Florida Atlantic University (FAU) and tools for success in the FAU Biology degree program. The course is for and about the student. It was developed to support students in identifying, accessing and navigating the numerous programs and opportunities that the FAU Biology Department offers its students as well as other FAU resources specific to student success in the discipline of biology. 

University Honors Seminar in Biological Sciences (BSC 1930) 3 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in biological sciences.

* Prerequisite courses must be completed with grades of "C-" or better.

Anatomy and Physiology 1 (BSC 2085) 3 credits
This course is the first part of a two-semester sequence in which students examine human anatomy and physiology through a systems approach based on the interaction between form and function, from the microscopic components of cells and tissues to the organismal level. Emphasis is placed on histology and the integumentary, skeletal, muscular and nervous systems. This is a General Education course. 

Anatomy and Physiology 1 Lab (BSC 2085L) 1 credit
Laboratory investigations to augment the content of BSC 2085. This is a General Education course.

Anatomy and Physiology 2 (BSC 2086) 3 credits
A study of the structure and functions of the following systems in the human body: cardiovascular, lymphatic, respiratory, digestive, urinary and reproductive.

Anatomy and Physiology 2 Lab (BSC 2086L) 1 credit
Laboratory investigations to augment the content of BSC 2086.

Biology Study Abroad (BSC 2952)  1-6  credits
Prerequisites: Minimum 2.5 GPA or higher and permission from the Office of International Programs
Biology credit for enrollment in an approved study abroad undergraduate program.

* Conservation Biology (BSC 3052) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L
A survey of the major concepts and current issues in conservation. Lectures address the value of biodiversity, the current state of biodiversity, threats to biodiversity and what has and can be done to stem the loss of biodiversity.

* Prerequisite courses must be completed with grades of "C-" or better.

Introduction to Biological Research (BSC 3453) 1 credit
Prerequisites: By application only and permission of instructor
This course is the first course in the program called Biological Research. Students apply and are accepted to this program before being permitted to register for the course. The course introduces students to research in biological fields. It also facilitates the matching of students to research faculty by promoting seminars and trains the students in ethics and intellectual property of ideas.

* Biological Research Writing (BSC 3481) 2 credits
Prerequisite:  BSC 3453
This course is intended for undergraduates to experience lab research while working on their own independent project and presenting it in the form of a graded proposal and public presentation. This is NOT an honors-level course.

Cooperative Education - Biology (BSC 3949) 1-3 credits
Grading: S/U

* Molecular Genetics of Aging (BSC 4022) 3 credits
Prerequisite:  BSC 1010 or BSC 1011
An in-depth examination of current theories of aging, molecular pathways modulating aging and major discoveries about aging in mammals and in different model organisms, including yeast, C. elegans, Drosophila and mouse.

Climate Change Biology: Ecosystems to Human Health (BSC 4307) 3 credits
This course focuses on biological aspects of rapid climate change on biomes and human health (e.g., loss of biodiversity in tropical rainforests limit drug discovery opportunities). Loss of ecosystems is threatening important ecosystem services to people around the world and has behavioral and physiological impacts on humans, affecting their health and well-being. Adaptations/solutions to the climate change crisis are also discussed. The format is lecture, in-class discussions and student-led presentations.

* Laboratory Methods in Biotechnology (BSC 4403L) 3 credits
Prerequisites: MCB 3020, MCB 3020L, BCH 3033 and PCB 3063
Course offers hands-on experience in some of the basic and essential lab skills required in molecular biology and biotechnology that are directly transferable to the workplace. Concepts behind designing and implementing controlled experiments involving manipulation of DNA, RNA and protein are discussed.

* Concepts in Bioinformatics (BSC 4434C) 3 credits
Prerequisites: PCB 3063; open to students in Biology, Bioengineering, Science/Engineering and Computer Science
The course outlines concepts underlying the mining of the human genome, blending biology, medicine and engineering.

* Biology of Cancer (BSC 4806) 3 credits
Prerequisites: MCB 3020
A consideration of chemical, viral and physical oncogenic agents; genetics and host factors; immunological response to neoplasia; chemotherapy.

* Prerequisite courses must be completed with grades of "C-" or better.

Directed Independent Study (BSC 4905) 1-3 credits
Prerequisite: Permission of instructor
Grading: S/U

Directed Independent Research in Biological Sciences (BSC 4910) 0-3 credits
Prerequisite: Permission of instructor
The student works closely with a research mentor to conduct research and inquiry in biological sciences. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Honors Research (BSC 4917) 3 credits
Prerequisites: BSC 4905 with minimum grade of "B," admission to Biology Honors Program and permission of instructor
Supervised independent research for students in the Biology Honors program. Must earn an "A" to receive Biology Honors Distinction.

Honors Thesis (BSC 4918) 3 credits
Prerequisite: BSC 4917 with minimum grade of "B"
A continuation of research initiated in BSC 4917. Requires preparation of a written paper and presentation of results at a departmental seminar. Must earn an "A" to receive Biology Honors Distinction.

Special Topics (BSC 4930) 1-3 credits
Special topics of interest to biological sciences students.

Seminar (BSC 4932) 1 credit
A variable title seminar series in which students experience information exchange among professional scientists. This course offers a more informal, less intimidating environment to talk with faculty, graduate students and other researchers. Invited speakers are from various institutions allowing students to network regarding further schooling/jobs.  Grading: S/U

Honors Scientific Communication (BSC 4934) 1 credit
Prerequisite: Permission of instructor
This is a course for students interested in scientific research. The students are introduced to various techniques and software important for data processing and presentation of their research data. The students learn to effectively present their research to the general public and to the scientific community in written form such as research proposals, conference presentations, seminars and publications.

Biology Study Abroad (BSC 4957)  1-6  credits
Prerequisite: Minimum 2.5 GPA or higher
Biology credit for enrollment in an approved study abroad undergraduate program.

* Prerequisite courses must be completed with grades of "C-" or better.

* Critical Thinking in Environmental Science (EVS 4021) 3 credits
Prerequisites: EVR 2017 or PCB 3352 or permission of instructor
An exploration of contemporary and emerging societal issues in environmental science, with an emphasis on seeking practical solutions to complex problems through reading, discussion, written critical analysis and practical research.

Directed Independent Research in Environmental Science (EVS 4916) 0-3 credits
Prerequisite: For bachelor's degree students in Arts and Letters and Science
The student works closely with a research mentor to conduct research and inquiry in environmental science. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Culture of Aquatic Organisms (FAS 4403) 3 credits
This course exposes students to the field of aquaculture (i.e., controlled cultivation of aquatic organisms) through lecture, discussion and assignments on topics such as culture requirements of aquatic species (mollusks, crustaceans, fish, seaweed), production systems and operation, disease diagnosis and biosecurity, nutrition, business feasibility and environmental issues. 

Artificial Intelligence Applications in Biology (IDS 4139) 3 credits
(See Interdisciplinary Studies courses, this section)

* Microbiology for Health Services (MCB 2004) 3 credits
Prerequisites:  BSC 1010 and BSC 1010L, or BSC 2085 and BSC 2085L, or BSC 2086 and BSC 2086L
Corequisite: MCB 2004
Introduction to microbiology with emphasis on the role of microbiology in health services. Covers the progressions and control of bacterial infections. Not acceptable as a substitute for MCB 3020 or as biology elective credit for Biology majors.

* Microbiology for Health Services Lab (MCB 2004L) 1 credit
Prerequisites: BSC 1010 and BSC 1010L, or BSC 2085 and BSC 2085L, or BSC 2086 and BSC 2086L
Introduction and demonstration of basic techniques in immunology, virology and bacteriology. Not acceptable as biology elective for Biology majors or as a substitute for MCB 3020L.

* General Microbiology (MCB 3020) 3 credits
Prerequisites:  BSC 1010, BSC 1010L, BSC 1011, BSC 1011L, CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
A survey of microbiological concepts, microbial types and the use of microorganisms in medicine, agriculture and industry. Lecture.

* General Microbiology Lab (MCB 3020L) 1 credit
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L, CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
The application of fundamental techniques in the isolation, cultivation and identification of microorganisms. Laboratory.

* Medical Bacteriology (MCB 4203) 3 credits
Prerequisite: MCB 3020
The classification and epidemiology of bacteria infecting humans. The role of host defenses in prevention and/or limitation of infection by these organisms and careful examination of the progression of the infections to the disease state. Lecture.

Epidemiology of Infectious Diseases (MCB 4276) 3 credits
This course examines the basic principles of epidemiology in the context of infectious diseases. Topics include the distribution and determinants of disease. Case studies from current literature supplement textbook material. The course places a strong emphasis on quantitative aspects of the field, including experimental design and basic statistics.

* Prerequisite courses must be completed with grades of "C-" or better.

* Virology (MCB 4503) 3 credits
Prerequisites: MCB 3020, 3020L 
An in-depth examination of the physical and structural characteristics, and the methods of replication of mammalian viruses. Viral pathogenesis, immunology, antiviral therapy, transformation, prions, and a detailed examination of human pathogenic viruses.

* Microbial Ecology (MCB 4603) 3 credits
Prerequisites: 8 credits of general biology; 8 credits of general chemistry
A study of factors influencing microorganisms in the environment and the influence of microorganism on the environment.

* Topics in Microbiology (MCB 4930) 1-4 credits
Prerequisites: 8 credits in microbiology; permission of instructor
A detailed consideration of specialized areas in microbiology, including bacterial genetics, bacterial physiology and mycology. Lecture.

* Marine Biodiversity (OCB 4032) 3 credits
Prerequisites: CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4032L
An overview of the diversity of marine algae, plants and animals, emphasizing the marine biota of Florida, with discussions of marine biodiversity issues.

* Marine Biodiversity Laboratory (OCB 4032L) 1 credit
Prerequisites: CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4032
An overview of the diversity of marine algae, plants and animals, emphasizing the marine biota of Florida, with field trips to local habitats.

* Marine Biology (OCB 4043) 2 credits
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L and (ZOO 3205 and ZOO 3205L or PCB 4043)
Corequisite: OCB 4043L
Discussions of the major concepts of modern marine biology with emphasis on life in subtropical and tropical seas.

* Marine Biology Field Studies and Laboratory (OCB 4043L) 2 credits
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L and (ZOO 3205 and ZOO 3205L or PCB 4043)
Corequisite: OCB 4043
Field studies of the varied marine habitats of southern Florida: laboratories corresponding to field studies, field trips.

* Marine Microbiology and Molecular Biology (OCB 4525) 3 credits
Prerequisites:  CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4525L
An overview of microbiology and molecular biology in the context of marine ecosystems. The course covers diverse aspects of marine microbiology and molecular biology, including both fundamental concepts and specialized topics, such as symbiosis, extreme environments, and biotechnological applications.

* Marine Microbiology and Molecular Biology Laboratory (OCB 4525L) 3 credits
Prerequisites: CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4525
An overview of microbiology and molecular biology techniques in the context of marine ecosystems. Three house of lab every week.

* Prerequisite courses must be completed with grades of "C-" or better.

* Marine Ecology (OCB 4633) 3 credits
Prerequisites:CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4633L
Basic and advanced concepts of marine ecology, including the history of the field, population dynamics in marine systems and the internal and external mechanisms that control marine populations. The final third of the class is an overview of the major marine ecosystems of the world.

* Marine Ecology Laboratory (OCB 4633L) 1 credit
Prerequisites: CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: OCB 4633
A hands-on laboratory course focusing on the ecology of marine organisms. Field sampling trips to local habitats complement laboratory-based activities. Six hours of lab every two weeks.

* Marine Science (OCE 4006)  3 credits
Prerequisites: CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
An introduction to geological, chemical and physical oceanography.

* Genetics (PCB 3063) 4 credits
Prerequisites: BSC 1010 and CHM 2045
An in-depth analysis of the mechanisms that operate in transmission genetics and an introduction to eucaryotic molecular genetics.

*Cell Biology (PCB  3023)  3 credits
Prerequisites:  BSC 1010, CHM 2045
Genetics at the molecular level as related to gene structure, function, variation and control with a comprehensive treatment of plant and animal cell structure and function. Basic concepts of cell physiology are treated.

Issues in Human Ecology (PCB 3352) 3 credits
A discussion and analysis of the major environmental issues confronting modern humans, with emphasis on southern Florida.

* Evolution (PCB 3674) 3 credits
Prerequisite:  BSC 1010
An in-depth examination of the mechanisms that operate in the evolutionary process.

* Human Morphology and Function 1 (PCB 3703) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L, CHM 2210, 2211; Corequisite: PCB 3703L
Normal structure and physiology of the human skeletal, muscle, and nervous systems. Lecture format. Designed for the preprofessional student planning admission into a graduate clinical program.

* Human Morphology and Function 1 Laboratory (PCB 3703L) 1 credit
Prerequisites: BSC 1010, 1010L, 1011, 1011L, CHM 2210, 2211; Corequisite: PCB 3703
Laboratory exercises illustrating principles presented in PCB 3703, considering the anatomy and physiology of the human skeletal, muscle, and nervous systems. Designed for the preprofessional student planning admission into graduate clinical programs.

* Prerequisite courses must be completed with grades of "C-" or better.

* Human Morphology and Function 2 (PCB 3704) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L, CHM 2210, 2211; Corequisite: PCB 3704L
Normal structure and physiology of the human cardiovascular, renal, respiratory, gastrointestinal, endocrine, and reproductive systems. Lecture format. Designed for the preprofessional student planning admission into graduate clinical programs.

* Human Morphology and Function 2 Laboratory (PCB 3704L) 1 credit
Prerequisites: BSC 1010, 1010L, 1011, 1011L, CHM 2210, 2211; Corequisite: PCB 3704
Laboratory exercises illustrating principles presented in PCB 3704, considering anatomy and physiology of the human cardiovascular, renal, respiratory, gastrointestinal, endocrine, and reproductive systems. Designed for the preprofessional student planning admission into graduate clinical programs.

* Principles of Ecology (PCB 4043) 3 credits
Prerequisites:  BSC 1010, 1010L, 1011, 1011L, CHM 2045
A functional approach to the basic principles and concepts of modern ecology. Lecture and field trips.

RI: Drosophila Genes and Behavior (PCB 4054C) 3 credits
Prerequisites: BSC 1010 and BSC 1010L with minimum grades of "B-" and permission of instructor
This course brings students closer to an understanding of how genetic variations can manifest in behavioral phenotypes using the widely utilized model organism, Drosophila melanogaster. Conceptual knowledge is gained in Drosophila husbandry, use as a model system, disease models and how genes affect behavior using behavioral assays. Students learn how to collect, analyze and derive significance from scientific data. This is a research-intensive (RI) course. (New course effective fall 2024.)

* Genetics Lab (PCB 4067L) 3 credits
Prerequisites: Students must have already taken BSC 1010 and 1011. While it is preferable to have also completed PCB 3063, qualified students currently enrolled in Genetics will be considered (please contact instructors)
This laboratory course is open to advanced undergraduates and graduate students. Students gain significant experience in classical and molecular genetics using two powerful model systems, the roundworm Caenorhabditis elegans and fruit fly Drosophila melanogaster. Experiments are performed to identify morphological and behavioral mutant phenotypes, investigate gene linkage and crossing over, establish dominant versus recessive and sex-linked versus autosomal inheritance, and generate genetic maps.

* Immunology (PCB 4233) 3 credits
Prerequisites: MCB 3020, 3020L 
The tissues, cells and biochemical components of the immune system, and the role of immune responses in the diagnosis and prevention of disease. Lecture.

* Freshwater Ecology (PCB 4301) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L, CHM 2045, 2045L, 2046, 2046L
Corequisite: PCB 4301L
A survey of the diversity, functions, environmental stressors and restoration of freshwater ecosystems, including groundwater, wetlands, lakes and rivers. Extra emphasis is placed on Florida freshwater ecosystems.

* Freshwater Ecology Lab (PCB 4301L) 1 credit
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L, CHM 2045, CHM 2045L, CHM 2046, CHM 2046L
Corequisite: PCB 4301
A hands-on field course focused on the ecology and biodiversity of various freshwater ecosystems. Field trips emphasize functions of ecosystems, species identification and quantitative differences between environments.

* Prerequisite courses must be completed with grades of "C-" or better.

* Molecular Genetics (PCB 4522)  3  credits
Prerequisite:  PCB 3063 with minimum grade of "C"
The genetic control and molecular basis of gene expression.

* Genes and Development (PCB 4594) 3 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L
Introduction to cellular and molecular mechanisms that underlie organismal development including differential gene regulation, pattern formation, animal stem cells and cloning, sex determination and developmental disorders.

Genes, Neurons and Behavior (PCB 4652) 3 credits
This course is designed for students to understand the neural basis of behavior at the single neuron level. Students read original research papers that use the most up-to-date methods in genetics, electrophysiology and behavior in a field now called "optogenetics." The objective of the course is to integrate students’ work in related courses (such as Comparative Animal Behavior, Biological Basis of Behavior, Genetics or Neuroscience) to gain an in-depth understanding of the field of neuroscience and behavior. The course includes neural simulations (run on Biology computers) designed to enhance an understanding of neuron function. This course also introduces students to the laboratories doing modern research in this field on the various FAU campuses. In some instances, it will lead students toward graduate programs at FAU and elsewhere in the United States. 

* Comparative Animal Physiology (PCB 4723) 3 credits
Prerequisites:  BSC 1010, BSC 1010L, BSC 1011, BSC 1011L, CHM 2045, CHM 2045L, CHM 2046, CHM 2046L, CHM 2210, CHM 2211
A comparison among vertebrates of major physiological systems; nerve, muscle, respiration, circulation, osmoregulation, excretion, temperature regulation and energy metabolism.

* Comparative Animal Physiology Lab (PCB 4723L) 1 credit
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L, CHM 2045, CHM 2045L, CHM 2046, CHM 2046L, CHM 2210, CHM 2211
Corequisite: PCB 4723
Laboratory experiments designed to explore fundamental physiological processes.

* RI: Neurophysiology (PCB 4832C) 3 credits
Prerequisites: BSC 1010, BSC 1010L and permission of instructor
Students learn neurophysiological signaling at the cellular level and whole animal by using wet laboratory experiences supplemented with lectures. The course examines signaling from the perspective of the electrical properties of neurons and their signaling, the basis for all neuronal function. Students learn through both theory and practical laboratory experiences and then translate their findings into modular reports. This is a research-intensive (RI) course.

Cellular Neuroscience and Disease (PCB 4842) 3 credits
Prerequisite: PCB 3023 or PCB 3063 with minimum grade of "B-"
The course focuses on the cellular aspects of human neurological diseases and disorders.
Lectures provide the basic knowledge about common cellular and molecular mechanisms, principles and pathways relevant to neuronal processes and neurological diseases.

Practical Cell Neuroscience (PCB 4843C) 3 credits
Prerequisites: PCB 3063 with minimum grade of "B-"
This course focuses on understanding neurophysiological signaling at the cellular level. It looks at signaling from the perspective of single ion channels to cellular synaptic transmission. Students learn through both theory and practical laboratory experiments and apply these principles in an experimental proposal that they present and execute, resulting in a final report.

* Prerequisite courses must be completed with grades of "C-" or better.

Honors Advanced Cell Imaging for Neuroscientists (PCB 4933C) 1 credit
Prerequisite: Permission of instructor
This is an intensive, four-day minimester in light microscopy for students participating in the FAU Max Planck Honors Program (MPHP). The course provides an introduction to practical imaging applications in cellular neuroscience that employ fluorescence and laser scanning.  Grading: S/U

Honors Advanced Genetics (PCB 4935) 1 credit
Prerequisite: Permission of instructor
Detailed study of molecular control of genetic processes including gene expression, development and optogenetics, and a review of historical and current genetic research methods.

Honors Advanced Physiology (PCB 4937C) 1 credit
Prerequisite: Permission of instructor
This course is designed for the preprofessional student planning admission into graduate clinical programs. The course consists of laboratory investigations illustrating the structure and physiology of the human body, including cardiovascular, renal, respiratory, gastrointestinal, endocrine and reproductive systems.

Honors Advanced Scientific Grant Writing (PCB 4956) 1 credit
Prerequisite: Permission of instructor
Students are introduced to content, techniques and software important in the preparation and submission of neuroscience grant proposals to the National Science Foundation and the National Institutes for Health.

Honors Introduction to Neuroscience Research (PSB 4003) 1 credit
Prerequisite: Permission of instructor
This course is designed to introduce incoming FAU Max Planck Honors Program (MPHP) participants to the Program. Students are introduced to neuroscience faculty and build an intellectual community with peer MPHP participants. Specific programmatic responsibilities that undergraduates typically do not encounter are emphasized as are analysis, synthesis and evaluation of information-components fundamental to eventual successful fulfillment of the research requirements associated with MPHP completion.

Honors Advanced Life Science Technologies (PSB 4110) 1 credit
Prerequisite: Permission of Instructor
Students are exposed to current and historic research technologies using specialized instrumentation, including advanced light microscopy, electron microscopy, CRISPR-Cas9 and more. Students learn how data are collected and analyzed using the various techniques. 

Honors Advanced Techniques in Neuroscience (PSB 4112C) 1 credit
Prerequisite: Permission of instructor
Students receive hands-on training in the application of current neuroscience research techniques using specialized instrumentation. Students learn to both generate and analyze data.  Grading: S/U

FAU Max Planck Honors Capstone (PSB 4902) 1-3 credits
Prerequisite: Permission of instructor
Directed research in which the student develops a significant deliverable that enhances public education in neuroscience (such as computational models or simulations or the development and hosting of an event). The deliverable should demonstrate a synthesis of the whole of the neuroscience content to which the student has been exposed via the FAU Max Planck Honors Program with an emphasis on community outreach.  Grading S/U

Honors Mentored Research (PSB 4910) 1-3 credits
Prerequisite: Permission of instructor
Directed research in which the student works closely with a faculty mentor to conduct research and inquiry in neuroscience toward completion of a scientific grant proposal, a scientific seminar presentation or poster and a scientific journal article.  Grading: S/U

* Prerequisite courses must be completed with grades of "C-" or better.

Honors Directed Independent Research (PSB 4916) 0-3 credits
Prerequisite: Permission of instructor
The student works closely with a research mentor to conduct research and inquiry in neuroscience. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student in alignment with the requirements of the FAU Max Planck Honors Program.  Grading: S/U

Honors Symposium Presentation (PSB 4922) 1 credit
Prerequisite: Permission of instructor
This is a guided independent study course individualized for each student. Students receive supervised study of research opportunities in neuroscience and attend the Max Planck Florida Institute for Neuroscience's Symposium Research Conference.  Grading: S/U

Honors Special Topics in Neuroscience (PSB 4931) 1-3 credits 
Prerequisite: Permission of instructor
Special topics in neuroscience of interest to FAU Max Planck Honors program participants. 

Max Planck Honors Seminar (PSB 4932) 1 credit
Prerequisite: Permission of instructor
The FAU Max Planck Honors Program (MPHP) seminar is a seminar series with distinguished speakers from outside and inside the Max Planck Florida Institute (MPFI) for Neuroscience.  Grading: S/U

Honors Journal Club in Neuroscience (PSB 4951) 1 credit
Prerequisite: Permission of instructor
Students learn to read, select, present and discuss recently published articles on relevant topics in neuroscience in a journal club format.  Grading: S/U

FAU Max Planck Honors Thesis (PSB 4970) 1-3 credits
Prerequisite: Permission of instructor
Directed research in which the student works closely with a faculty mentor to conduct research and inquiry in neuroscience toward completion of a written honors thesis. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student in alignment with requirements of the FAU Max Planck Honors Program.  Grading: S/U

* Invertebrate Zoology (ZOO 3205) 3 credits
Prerequisites: 8 credits in general biology
Corequisite:  ZOO 3205L
A survey of the invertebrate phyla from the Protozoa through the lower Chordate stressing comparative aspects of morphology and development as well as phylogenetic aspects and ecology.

Invertebrate Zoology Lab (ZOO 3205L) 2 credits
Prerequisites: 8 credits in general biology
Corequisite: ZOO 3205
Laboratory studies of the structure and diversity of invertebrate organisms.

Introduction to Animal Locomotion (ZOO 4373) 3 credits
Prerequisites: BSC 1010, BSC 1011 with minimum grades of "C"
This course explores animal movement over a range of species and environments. It explores modes of locomotion taking into account anatomy and mechanics of both skeletal and muscular systems and the media through which an animal moves. Topics are presented through lecture material and readings from the primary literature and text.

* Ornithology (ZOO 4472) 2 credits
Prerequisite: 8 credits of biology
Corequisite: ZOO 4472L
The study of the anatomy, physiology, taxonomy, evolution, ecology and special adaptations of birds. Lecture.

Ornithology Laboratory (ZOO 4472L) 2 credits
Corequisite: ZOO 4472
Laboratory and field study of birds. Also includes field identification of major groups of birds. Laboratory and field study.

* Prerequisite courses must be completed with grades of "C-" or better.

Vertebrate Structure Development and Evolution  (ZOO 4690) 3 credits
Prerequisite: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L with minimum grades of "C"
Corequisite: ZOO 4690L
Course covers phylogeny and diversity of vertebrate structures, along with their development through organogenesis, differentiation and growth lead to an understanding of the relationships and functioning of living organisms. Key events in vertebrate evolution are discussed.

Vertebrate Structure and Development Laboratory  (ZOO 4690L) 2 credits
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L with minimum grades of "C"
Corequisite: ZOO 4690
Laboratory emphasis is on the diversity, development, form and function of vertebrate structures. Study of vertebrates includes major developmental stages, skeletal preparations, dissection of preserved specimens and demonstrations to integrate understanding of vertebrate form.

* Principles of Human Neuroanatomy (ZOO 4742) 3 credits
Prerequisites: BSC 1010, BSC 1010L, BSC 1011, BSC 1011L
This course focuses on the basic structural components and interconnections of the human brain, spinal cord and peripheral nervous system at the level of functional circuits. A discussion of diseases and injuries that disrupt the morphological integrity of the human nervous system is included.

Biological Sciences Graduate Courses

Flora of South Florida (BOT 5155) 2 credits
Prerequisites: BOT 3223, 3223L, or the equivalent, or permission of instructor
Corequisite: BOT 5155L
A study of the major plant associations existing in southern Florida, their positions in the ecology of the region, and the history of their relationships to the temperate and tropical floras.

Flora of South Florida Laboratory (BOT 5155L) 2 credits
Corequisite: BOT 5155
An examination of the plants and plant associations in southern Florida, including laboratory and field trips.

Advanced Plant Cell Biology (BOT 5582) 3 credits
This course covers cell and molecular biology using experimental approaches, including discussion of model organisms.

Plant Ecology (BOT 6159C) 4 credits
An introduction to the fundamentals of plant ecology, the major ecosystems of South Florida and the ecology of their characteristic vegetation. The ecology of plants is examined at four basic levels of organization: the individual plant, plant populations, plant communities and ecosystems.

Advanced Plant Physiology (BOT 6506) 2 credits
Prerequisite: Graduate standing or permission of instructor
A study of plant life involving growth, development, reproduction (flowering), and interaction with the environment. A detailed discussion of the related principles in cellular biology, biochemistry, molecular biology, evolution biology and ecology and of research tools/methodology.

Advanced Plant Physiology Lab (BOT 6506L) 2 credits
Prerequisite: Graduate standing or permission of instructor
This course uses a series of lab exercises to help students better understand the principles of plant physiology. It emphasizes hands-on training in experimental skills and learning of experiment design, research tools and methodology.

Advanced Plant Biotechnology (BOT 6735C) 3 credits
Prerequisite: Graduate standing or permission of instructor
This course combines lectures and labs. Each student has his/her own research project. This course provides materials and training to help students gain current knowledge of structure and function of plant genomes, genes and gene products, to learn hands-on techniques of DNA-transfer-based plant biotechnology and to prepare for a professional career in plant/agriculture biotechnology research

Special Topics (BSC 5931) 1-4 credits

Marine Conservation Biology (BSC 6316) 3 credits
Prerequisites: For graduate Biological Sciences, Environmental Sciences or Integrative Biology majors or permission of instructor
Marine conservation biology is an emerging discipline that draws together the fundamentals of biology, marine science, conservation and management, ethics and policy. Students gather and integrate information from diverse areas to understand threats to marine biodiversity and use contemporary techniques to address marine conservation problems.

Advances in Finfish Aquaculture (BSC 6342) 3 credits
Prerequisite: Culture of Marine Organisms or permission of instructor
Explores issues affecting finfish aquaculture for food production and fisheries stock enhancement worldwide. Topics include sustainability, new and historic methods for fish culture and issues and controversies faced by finfish aquaculturists.

Integrative Biology 1 (BSC 6390) 3 credits
Prerequisite: Admission to Integrative Biology Ph.D. program or permission of instructor
Through lectures, readings, journal club, classroom discussions, and student papers, course explores the idea of integrative biology and connectivity in biological systems.

Laboratory Methods in Biotechnology (BSC 6408L) 3 credits
Prerequisite: Permission of instructor
This lab course provides students with hands-on experience in some of the basic, but essential lab skills required in molecular biology and biotechnology that are directly transferable to the workplace. Emphasis is on understanding the concepts behind designing and implementing controlled experiments. These techniques involve manipulation of DNA, RNA and protein.

Practical Cell Neuroscience (BSC  6417C ) 3 credits
Prerequisite: Graduate standing
This course brings the students closer to understanding neurophysiological signaling at the cellular level, where only a few cells communicate in close proximity. The course looks at signaling from the perspective of single ion channels to cellular synaptic transmission. The electrical properties of neurons and their signaling are the basis for all neuronal function. The students learn these principles through both theory and practical laboratory and apply them in an experimental proposal, which they present and then execute resulting in a final report.

Computer Graphics for Biologists (BSC 6455) 3 credits
Prerequisite: Graduate standing or permission of instructor
This hands-on course introduces students to how computer graphics are used in biological sciences for illustration, data extraction and presentation. Each class will integrate formal lecture sessions with hands-on application at a computer.

Bioinformatics (BSC 6458C) 4 credits
Prerequisite: Permission of instructor
A practical approach to accessing nucleic/protein databases, management of databases, identification of genes, and electronic expression profiling.

Scientific Communication (BSC 6846) 3 credits
Prerequisite: Permission of instructor
Introduces students interested in scientific research to various techniques and software important for data processing and presentation of research data. Students learn to effectively present research to the general public and to the scientific community in written form, such as research proposals, conference presentations, seminars and publications.

Directed Independent Study (BSC 6905) 1-3 credits
Grading: S/U

Integrative Biology Ph.D. Lab Rotation (BSC 6913) 1-9 credits
Prerequisite: Permission of instructor
A lab rotation aids the student in making a well-informed choice of lab and supervisor for their dissertation research without a long-term commitment. It allows the student to be exposed to a range of science and networking opportunities within the program. The student participates in all lab activities, like any other lab member. The student may be assigned to work with another student/postdoctoral fellow in the lab or take on a simple project achievable within the rotation period.  Grading: S/U

Directed Independent Research in Biological Sciences (BSC 6917) 0-3 credits
Prerequisite: Permission of instructor
The student works closely with a research mentor to conduct research and inquiry in Biological Sciences. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Seminar (BSC 6935) 1 credit
Grading: S/U

Special Topics (BSC 6936) 1-4 credits

Ecology Research Seminar (BSC 6937) 1 credit
A seminar course in which students select papers from ecological literature and facilitate discussions with other students and professors. Course grading is dependent on participation in class discussions. All students will lead at least one paper discussion.  Grading: S/U

Seminar (BSC 6938) 1 credit
A variable title seminar series for students to experience information exchange among professional scientists. This course offers a more informal, less intimidating environment in which to talk with faculty, graduate students and other researchers. Invited speakers are from various institutions allowing students to network regarding further schooling/jobs.  Grading: S/U

Professional Science Master's (P.S.M.) in Business Biotechnology - Scientific Internship (BSC 6946) 2 credits
Prerequisite: Permission of instructor
Course provides students with experience and exposure to a research environment in a for-profit biotechnology/biopharmaceutical company.  Grading: S/U

Professional Science Master's (P.S.M.) in Business Biotechnology - Business Internship (MAN 6946) 2 credits
Prerequisite: Permission of instructor
Students gain experience and exposure to the business side of a research environment in a for-profit biotechnology/biopharmaceutical company, including raising capital, intellectual property, finance and marketing.  Grading: S/U

Journal Club - Molecular Biology (BSC 6956) 1 credit
Prerequisite: Molecular biology
A practical approach to learning how to discuss scientific literature in molecular biology in a journal club format

Journal Club (BSC 6958) 1 credit
A variable title journal club series for students to experience scientific information exchange. This course offers a more informal, less intimidating environment in which to talk with faculty, graduate students and other researchers.  Grading: S/U

Master's Comprehensive Exam (BSC 6962) 1 credit
Prerequisite: Permission of instructor
Students in the M.S. non-thesis and M.S.T. programs take three written comprehensive examinations on designated areas within the microbiology and organismal specialties (as stated in the FAU Regulations for Master's Degrees). The written exams are administered on the dates agreed to by the student and their committee members. Question types require written responses, primarily in essay and definition formats.  Grading: S/U

Master's Proposal Seminar (BSC 6963) 1 credit
Prerequisite: Permission of instructor
This seminar is presented by the student usually in the first year (no later than the student's third semester). The student is guided by the advisor and Graduate Supervisory Committee on the proposal's format that is best suited to the student's discipline, following the Graduate College's formatting requirements. The student adheres to all thesis proposal procedures and the timeline. The student presents the seminar to an open audience and the Graduate Supervisory Committee asks questions on the proposal and decides if it warrants approval.  Grading: S/U

Master's Thesis (BSC 6971) 1-6 credits
Prerequisite: Permission of instructor
This course is intended for Biology master's students conducting original research on their master's thesis topic.  Grading: S/U

Master's Defense Seminar (BSC 6975) 1 credit
Prerequisite: Permission of instructor
A thesis results and defense seminar is presented by the student in the fall or spring of the second year. The student is guided by the advisor and Graduate Supervisory Committee on the proposal's format that is best suited to the student's discipline, following the Graduate College's formatting requirements. The student adheres to all thesis defense procedures and the timeline. The student presents the seminar to an open audience, and the Graduate Supervisory Committee asks questions on the results and defense and decides if it warrants approval. Grading: S/U

Advanced Research in Integrative Biology (BSC 7978) 1-9 credits
Prerequisite: Admission to Ph.D. program in Integrative Biology
Research that is focused and relevant to the student's course of study in the Ph.D. program in Integrative Biology. This course requires oversight by the student's dissertation advisor, who can grade the student's performance at the end of the semester.  Grading: S/U

Dissertation (BSC 7980) 1-9 credits
Prerequisite: Admission to doctoral candidacy
Dissertation research in Ph.D. program in Integrative Biology.  Grading: S/U

Ocean Optics and Remote Sensing (EOC 6267) 3 credits
This course explores the field of bio-optics and associated applications toward ocean color remote sensing of the environment, including open ocean, coastal ocean and inland lake systems.

Environmental Science Directed Independent Study (EVS 6905) 1-3 credits
Prerequisite: Permission of instructor
This course provides graduate students with concrete research experience in a particular area of environmental science not normally covered in a course.  Grading: S/U

Directed Independent Research in Environmental Science (EVS 6916) 0-3 credits
Prerequisite: For students in Environmental Science master's program
The student works closely with a research mentor to become competent in at least one aspect of graduate-level research and inquiry in environmental science. This course is typically lab- or field-based. The requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student. Grading: S/U

Fundamentals of Environmental Research (EVS 6917) 1 credit
Prerequisite: For students in the Environmental Science master's program
This weekly seminar develops students' skills in scientific presentations through lectures and student presentations and provides basic introduction to common practices or requirements for the developing, conducting and reporting of environmental science research programs.  Grading: S/U

Environmental Science Colloquium Series (EVS 6920) 1 credit
Environmental Science students attend colloquia presented by faculty, professional environmental scientists and advanced graduate students. Students gain experience in written and oral communication through class discussions, writing assignments and presentations.  Grading: S/U

Environmental Science Internship (EVS 6949) 0-3 credits
Prerequisite: Permission of instructor
This is an internship course that offers students "real-world" experience in a structured format within environmental science disciplines (such as biology, chemistry, geosciences, environmental engineering or urban and regional planning), which are related to each student's graduate degree program.  Grading: S/U

Writing Science for Ecologists (EVS 6956) 3 credits
Communicating science through writing is a key aspect of any career in ecology, environmental science or natural resources. In this course, students use a combination of instruction and practice to learn key techniques to hone their writing skills. Topics range from grammatical structure to tailoring the written message for the audience. This writing-intensive course uses the iterative approach of writing, reviewing, editing and revising with peer support groups to allow students to improve their written products. Students also gain familiarity with the process of developing scientific documents (e.g., manuscripts, grant proposals, technical reports) in an increasingly collaborative field focusing on the peer-review process used by primary literature journals.

Environmental Science Master's Thesis (EVS 6971) 1-6 credits
Prerequisite: Permission of instructor
This course is intended for graduate students conducting original research on their master's thesis topic. Grading: S/U

Plant Microbiomes and Applications (MCB 6672) 2 credits
This course explores microbial associations with plants and roles they play in plant health, invasion, disease and yield. Emphasis is on the microbiomes of the phyllosphere, caulosphere and rhizosphere of plants with applications in conservation ecology, horticulture and agriculture.

Advances in Human Microbiomes (MCB 6674) 3 credits
A presentation of the community structure and ecology of the human microbiomes including oral, skin and gut. The roles and functional diversity of the gut bacteria as well as the factors that shape the microbiome niches are discussed. Concepts in dysbiosis and trends in engineering the human microbiomes are presented.

Advanced Topics in Microbiology (MCB 6930) 1-4 credits
Prerequisites: 16 credits in microbiology and permission of instructor
A critical review of specialized topics in bacteriology, virology, mycology, immunology, or other areas of microbiology. This is a lecture course.

Biological Oceanography (OCB 6066) 3 credits
Prerequisites: BSC 1010 and BSC 1011
This course explores major biological processes within the world's oceans, including estuaries, continental margins and the open ocean.

Coral Reef Ecosystems (OCB 6266) 3 credits
Prerequisite: Permission of instructor
Explores the structure, biology, ecology, significance and current status of coral reef ecosystems through a combination of lectures and discussions.

Coral Reef Ecosystems Lab (OCB 6266L) 1 credit
Prerequisite: Permission of instructor
Corequisite: OCB 6266; ability to swim/snorkel 400 yards; preferred AAUS scientific diver certification
Field-and-laboratory-based exploration of coral reef ecosystems focused on coral identification and underwater scientific methods for coral research.

Marine Trophic Ecology (OCB 6638C) 3 credits
Prerequiste: OCB 6066 or equivalent or permission of instructor
This course involves the advanced study of theory and techniques in marine trophic ecology. The course begins with an overview of marine communities and habitats over which trophic interactions occur, followed by discussion of the various associated processes (e.g., predation, energy transfer) involved at the individual, population, community and ecosystem level. Throughout the process, students are exposed to various techniques used to study trophic interactions in marine environments, from traditional dissections of predators to chemical/genetic tracers and emerging technologies such as biologging. 

Marine Fisheries Ecology and Management (OCB 6715C) 4 credits
Prerequisites: For graduate Biology, Environmental Science and Marine Science majors or permission of instructor
This course involves the advanced study of theory and techniques in fisheries science, including behavior and ecology of exploited fisheries populations (shellfish, finfish, etc.), and protected resources, such as applications to resource management.

Natural History of the Indian River Lagoon (OCB 6810) 3 credits
Prerequisite: Graduate standing or permission of instructor
An overview of the marine plants and animals, habitats, and environmental conditions in the Indian River Lagoon, including human impacts. Field trips to local habitats complement lecture and labs.

Chemical Oceanography (OCC 6050) 3 credits
Prerequisite: CHM 2045; recommended: CHM 2046 and CHM 2210
This course explores major chemical processes within the world's oceans, including estuaries, continental margins and the open ocean.

Image and Video Processing and Vision in Marine Environment (OCE 5266) 3 credits
Prerequisite: EEE 4510 or permission of instructor
Course studies the fundamentals of electro-optical image and video processing in the underwater environment. Covers topics such as underwater image and video enhancement techniques, underwater stereo vision and emerging underwater imaging system concepts.

Marine Global Change (OCE 6019) 3 credits
Prerequisite: Graduate standing or permission of instructor
Introduction to long-term and global scale changes in terrestrial and marine environments and the impact those changes have in marine settings, especially the coastal ocean. Natural and anthropogenic changes are described and compared. Topics include invasions, extinctions, climate change, food web modifications, and freshwater issues in the coastal zone.

Biological and Chemical Oceanography (OCE 6057) 3 credits
Prerequisites: Graduate standing, CHM 2045, BSC 1010 and BSC 1011
Explores major biological and chemical processes within the world’s ocean, including estuaries, continental margins and the open ocean.

Ecology of Infectious Marine Diseases (OCE 6059) 3 credits
Prerequisites: Graduate standing and PCB 6772; PCB 4043 is recommended
Marine wildlife disease ecology takes a holistic approach to examining multi-parasite and multi-host systems across diverse habitats and geographic regions. This course covers a wide range of marine phyla and examines the multi-faceted role of the environment in the ecology and epidemiology of infectious marine disease.

Marine Science and Oceanography Directed Independent Research (OCE 6908) 1-3 credits
Prerequisite: Permission of instructor
This course provides graduate students with research experience not covered in other courses.  Grading: S/U

Marine Science and Oceanography Colloquium (OCE 6922) 1 credit
This course is intended to bring together faculty and students in the field of marine science at FAU to showcase research ongoing at the Boca Raton, Davie and Harbor Branch Oceanographic Institute (HBOI) campuses. Occasional visiting speakers are welcome as well. The course is broadcast among the Boca Raton, Davie and HBOI campuses, with participation by students and faculty at all three locations. Topics are varied and depend on the current research interests of students and faculty.  Grading: S/U

Marine Science and Oceanography Comprehensive Exam (OCE 6964) 1 credit
Prerequisite: Permission of instructor
Students in the M.S. non-thesis and M.S.T. programs take three written comprehensive examinations on designated areas within the marine science and oceanography specialties (as stated in the FAU Regulations for Master's Degrees). The written exams are administered on the dates agreed to by the student and their committee members. Question types require written responses, primarily in essay and definition formats. Grading: S/U

Marine Science and Oceanography Thesis Proposal (OCE 6970) 1 credit
Prerequisite: Permission of instructor
This seminar is presented by the student, usually in the first year (no later than the student's third semester). The student is guided by the advisor and Graduate Supervisory Committee on the proposal's format that is best suited to the student's discipline, following the Graduate College's formatting requirements. The student adheres to all thesis proposal procedures and the timeline. The student presents the seminar to an open audience and the Graduate Supervisory Committee asks questions on the proposal and decides if it warrants approval. Grading: S/U 

Marine Science and Oceanography Master's Research (OCE 6972) 1-9 credits
Prerequisite: Permission of instructor
This course provides graduate students with research experience not covered in other courses, including master's research. Grading: S/U

Marine Science and Oceanography Thesis Defense (OCE 6975) 1 credit
Prerequisite: Permission of instructor
A thesis results and defense seminar is presented by the student in the fall or spring of their second year. The student is guided by the advisor and Graduate Supervisory Committee on the proposal's format that is best suited to the student's discipline, following the Graduate College's formatting requirements. The student adheres to all thesis defense procedures and the timeline. The student presents the seminar to an open audience, and the Graduate Supervisory Committee asks questions on the results and defense and decides if it warrants approval. Grading: S/U 

Advanced Genetics Lab (PCB 5064L) 3 credits
Prerequisites: Graduate standing and BSC 1010, BSC 1011 and PCB 3063 with minimum grades of "C-" or better
This laboratory course is open to advanced undergraduates and graduate students. Students gain significant experience in classical and molecular genetics using two powerful model systems, the roundworm Caenorhabditis elegans and fruit fly Drosophila melanogaster. Experiments are performed to identify morphological and behavioral mutant phenotypes, investigate gene linkage and crossing over, establish dominant versus recessive and sex-linked versus autosomal inheritance and generate genetic maps.

Advanced Molecular Genetics of Aging (PCB 5245) 3 credits
Prerequisite:  BSC 1010 or BSC 1011 with a minimum grade of "C-"
An in-depth examination of current theories of aging, molecular pathways modulating aging and major discoveries about aging in mammals and in different model organism, including yeast, C. Elegans, drosophila and mouse.

Conservation Biology (PCB 6045) 3 credits
Prerequisite: Graduate standing or permission of instructor
A study of the principles and practice of conservation biology. Emphasis on the primary threats to biodiversity and the application of contemporary tools to solve conservation problems.

Advanced Ecology (PCB 6046) 3 credits
Prerequisites: PCB 4043 or ecology equivalent
Provides graduate students with a background in development of ecology as a science and current ecological theory and application of ecology for ecosystem management.

Advanced Immunology (PCB 6236) 3 credits
Prerequisite: PCB 4233
A study of the chemical and biological natures of antigens and antibodies: their preparation and reactions in vivo and in vitro, their applications in basic science and therapy, and the immunochemical and experimental methods involved with tagged or free immunologic products. It is a lecture course.

Freshwater Ecology (PCB 6307)3 credits
Prerequisites: ZOO 3205, ZOO 3205L
Corequisite: PCB 6307L
A study of limnological processes, with an emphasis on subtropical freshwater habitats, their physicochemical characteristics, and associated fauna and flora.

Freshwater Ecology Laboratory and Field Studies (PCB 6307L) 2 credits
Corequisite: PCB 6307
A field oriented study of the freshwater plants and animals of southern Florida and the techniques employed on the analysis of freshwater habitats.

Marine Ecology (PCB 6317) 3 credits
Prerequisites: ZOO 3205 and OCB 4043
Corequisite: PCB 6317L
A study of the principles, concepts, and techniques of marine and estuarine ecology. Environmental factors, adaptations, habitats, communities, and applications of current ecological theory are studied. Lecture, laboratory, and field work are included.

Marine Ecology Laboratory and Field Studies (PCB 6317L) 2 credits
Corequisite: PCB 6317
A study of the Methods and Techniques of marine ecological research and their application in the field. Data collections, analysis and presentation.

Ecological Theory (PCB 6406) 3 credits
Prerequisites: PCB 4043 or equivalent and senior or graduate level proficiency in Biology or permission of instructor
A functional approach to and a critical examination of the principles and concepts in ecosystem theory.

Climate Change: Ecosystems to Human Health (PCB 6409) 3 credits
Prerequisite: Graduate standing or permission of instructor
This course covers the physical science of climate change and how these changes modify the hydrological cycle and thermal regions on a global scale. It also covers current adaptation plans on the global, national and regional scale.

Experimental Design and Biometry (PCB 6456)  3 credits
Prerequisite: Permission of instructor
Course covers basic statistical concepts and procedures that are necessary to conduct statistical analysis in biological research. The topics covered are probabilistic foundations, experimental designs and their analyses, summarizing and visualizing data, and inferential statistics.

Genes and Development (PCB 6595) 3 credits
Prerequisite: Graduate standing or permission of instructor
Students become familiar with the cellular and molecular mechanisms underlying organismal development, including differential gene regulation, intercellular communication, fertilization, pattern formation, organogenesis, animal stem cells and cloning, evolution and development, sex determination and developmental disorders.

Environmental Physiology (PCB 6749) 3 credits
This course examines how animals function in and respond to their natural environments, that is the study of animals in their natural habitat, with reflections on behavioral strategies, ecology and evolution. The initial part of the course looks at specific physiological challenges faced by animals in different environments (e.g., salt and water balance). The second part of the course looks at how animals adapt to specific environments. Both textbooks and recent journal articles are utilized as source materials.

Aquatic Animal Health (PCB 6772) 3 credits
Prerequisite: Graduate standing
A comprehensive study of basic processes in aquatic organisms, with an emphasis on marine fish and invertebrates.

Physiology of Marine Animals (PCB 6775) 3 credits
Prerequisites: 4 credits in physiology
A study of how marine animals function in their environment.

Neurophysiology (PCB 6835C) 3 credits
Prerequisite: Graduate standing or permission of instructor
Neurophysiology brings students closer to understanding neurophysiological signaling at the cellular level and whole animal through the use of actual wet and dry laboratory experiences supplemented with lectures. Focuses on signaling from the perspective of the electrical properties of neurons and their signaling, the basis for all neuronal function. Students learn through both theory and practical laboratory experiences and then translate their findings into modular reports.

Advanced Neurophysiology Lab (PCB 6837L) 3 credits
Prerequisite: Graduate standing or permission of instructor
Advanced neurophysiology brings students closer to understanding neurophysiology signaling at the cellular level and whole animal through the use of actual laboratory experiences. Focuses on signaling from the perspective of single ion channels to cellular synaptic transmission and behavior. The electrical properties of neuronal and their signaling is the basis for all neuronal function.

Cellular Neuroscience and Disease (PCB 6849) 3 credits
Prerequisite: PCB 3063 and permission of instructor; Corequisite: PCB  3023
This course focuses on the cellular aspect of human neurological diseases, analyzing different signaling pathways and connecting malfunctions in them to various neurological disorders.

Sensory Biology and Behavior of Fishes (PCB 6871) 3 credits
Prerequisite: Permission of instructor
A study of the anatomy and physiology of sensory structures in fishes, as well as the neural processing and behaviors elicited by these senses. Topics include vision, olfaction, audition, gustation, lateral line, tactile and electrosensation.

Neuroscience Seminar (PSB 6920) 0-1 credit
A seminar on current research topics and techniques from leaders in the field.  Grading: S/U

Advanced Animal Locomotion (ZOO 6376) 3 credits
Prerequisite: Permission of instructor
This course explores animal movement over a range of species and environments. Students explore modes of locomotion by examining anatomy and mechanics of both skeletal and muscular systems and the media through which an animal moves. Topics are presented through lecture material and readings from the primary literature and text. Students show mastery of topics through presentations utilizing active learning techniques and written papers.

The Biology of Sea Turtles (ZOO 6406) 3 credits
Prerequisites: Graduate standing and permission of instructor
This upper-level lecture, lab and field course introduces the behavioral, ecological and evolutionary adaptations of sea turtles and conservation-related topics. Major topics include species identification, functional anatomy, reproduction, migration, navigation, feeding ecology, physiology, development, nets and hatchlings, threats to survival and conservation strategies.

Biology of Sharks and Their Relatives (ZOO 6409) 3 credits
Prerequisite: Permission of instructor if the student is currently enrolled as an undergraduate
Studies biology, ecology, physiology, behavior and taxonomy of the elasmobranch fishes. Includes a review of extant families and contemporary topics in elasmobiology through readings from the primary literature.

Seminar in Ichthyology (ZOO 6459) 1-2 credits
Prerequisite: 
A critical review of current literature dealing with fishes and fisheries. This course may be repeated for credit to a maximum of 4 credits.  Grading: S/U

Principles in Behavioral Ecology (ZOO 6520) 3 credits
Prerequisites: For M.S., Ph.D. students in College of Science with B.S. in Biology, Psychology or Zoology
This course seeks to understand the evolution and fitness consequences of behavior. Students read scientific papers and discuss key concepts and areas of study in the field of behavioral ecology.

Seminar on Emerging Topics in Avian Ecology (ZOO 6544C) 1 credit
Prerequisite: Graduate standing or permission of instructor
Primarily student-led discussions of recent papers on an emerging topic in avian ecology. Topic varies each semester and has application to the broader field of ecology. Students may take the course repeatedly up to a maximum of 4 credits.

Human Neuroanatomy (ZOO 6748) 3 credits
Prerequisite: Graduate standing or permission of instructor
Detailed study of the anatomical components of the human nervous system at the cellular and systems level, with particular emphasis on the structure and function of the brain and spinal cord. An overview of diseases and injuries of the human nervous system will be included.

Chemistry and Biochemistry

Undergraduate Courses /link to graduate courses

Biochemistry 1 (BCH 3033) 3 credits
Prerequisites: CHM 2210 and CHM 2211
The organic chemistry of biological compounds; carbohydrates; amino acids; peptides, and proteins; nucleosides and nucleotides; nucleic acids, replication, transcription and translation; saponifiable lipids; steroids and terpenes.

Biochemistry 2 (BCH 3034) 3 credits
Prerequisite: BCH 3033
Bioreactions and the role of enzymes and coenzymes; energy aspects; generation and utilization of ATP; metabolic pathways; regulatory mechanisms; photosynthesis.

Biochemistry Laboratory (BCH 3103L) 3 credits
Prerequisites: BCH 3033 and CHM 2211L with minimum grades "C"
An introduction to experimental techniques in physical chemistry as applied to biological systems; quantitative measurements in biochemistry.

RI: Advanced Biochemistry (BCH 4035) 3 credits
Prerequisite: BCH 3033 with minimum grade of "C"
Topics cover the structure and function of proteins and their biotechnological, medical and scientific use. In addition, students are assigned research topic assignments that facilitate understanding and practical application of research methods used in protein chemistry. This is a research-intensive (RI) course.

Contemporary Chemical Issues (CHM 1020C) 3 credits
This course provides students with an introduction to chemical principles and applications for the non-science major. Students will engage in problem solving and critical thinking while applying chemical concepts. Topics will include the scientific method of problem solving, classification of matter, atomic theory, the periodic table, gases, chemical reactions, energy and chemical bonds. This is a General Education course. 

Introductory Chemistry (CHM 1025) 3 credits
Introductory readiness course in general chemistry for students with weaker but satisfactory backgrounds in high school chemistry and algebra.

University Honors Seminar in Chemistry (CHM 1930) 3 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in chemistry.

Special Topics (CHM 1932) 1-4 credits
Special topics course in chemistry.

General Chemistry for the Health Sciences (CHM 2032) 3 credits
Corequisite: CHM 2032L
An introduction to the fundamental concepts of chemistry: scientific measurements; atomic theory; molecules and chemical bonds; chemical reactions; aqueous solutions; salts and electrolytes; acid-base theory; radioactivity and nuclear chemistry. Orientation toward majors in the allied health fields. This is a General Education course.

General Chemistry for the Health Sciences Lab (CHM 2032L) 1 credit
Corequisite: CHM 2032
Intermediate experimental studies of chemical principles. This is a General Education course.

General Chemistry 1 (CHM 2045) 3 credits
Prerequisites or Corequisites: Students must have passed CHM 1025 or are currently enrolled or previously passed one of the following: MAC 1105, MAC 1114, MAC 1140, MAC 1147, MAC 2233, MAC 2311, MAC 2210
Corequisite: CHM 2045L
This course is designed for students pursuing careers in the sciences or who need a more rigorous presentation of chemical concepts than is offered in an introductory course. Students engage in problem solving and critical thinking while applying chemical concepts. Topics include the principles of chemistry including atomic theory, electronic and molecular structure, measurement, stoichiometry, bonding, periodicity, thermochemistry, nomenclature, solutions and the properties of gases. This is a General Education course. 

General Chemistry 1 Lab (CHM 2045L) 1 credit
Corequisite: CHM 2045
An introduction to experimental techniques in chemistry designed to demonstrate basic chemical principles. This is a General Education course.

General Chemistry 2 (CHM 2046) 3 credits
Prerequisite: CHM 2045; Corequisite: CHM 2046L
An introduction to chemical principles including atomic structure, chemical bonding, kinetics, thermodynamics and properties of the elements. A prerequisite to all other chemistry courses in science programs.

General Chemistry 2 Lab (CHM 2046L) 1 credit
Prerequisites: CHM 2045, CHM 2045L; Corequisite: CHM 2046
An introduction to experimental techniques in chemistry designed to demonstrate basic chemical principles. Qualitative analysis of selected anions and cations.

Organic Chemistry 1 (CHM 2210) 3 credits
Prerequisite: Minimum grades of "C" in CHM 2045, 2045L, 2046, and 2046L
A study of the compounds of carbon and their physical properties, structures, chemical behavior and reaction mechanisms.

Organic Chemistry 2 (CHM 2211) 3 credits
Prerequisite: Minimum grade of "C" in CHM 2210
Continuation of CHM 2210.

Organic Chemistry Lab (CHM 2211L) 2 credits
Prerequisite: CHM 2210
Prerequisite or Corequisite: CHM 2211
Experimental study of the synthesis, purification, and identification of organic compounds using microscale techniques.

Directed Independent Research in Chemistry (CHM 2915) 1-3 credits
Students work closely with research mentors to conduct research and inquiry in Chemistry. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Chemistry (CHM 2916) 0-3 credits
Students work closely with research mentors to conduct research and inquiry in Chemistry. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Chemistry Study Abroad (CHM 2952) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Chemical Literature (CHM 3060) 1 credit
Prerequisites: CHM 2211 and some experience with a foreign language
Skills in searching the chemical literature for information on specific topics to be presented in written and oral reports.

Environmental Chemistry (CHM 3080) 3 credits
Prerequisites: CHM 2045, 2046, 2210, 2211
The chemistry of the environment. Includes processes in the atmosphere, hydrosphere, and geosphere, and their interactions. Selected emphasis on the physical processes that distribute materials through the environment. Topics include ozone, smog, greenhouse gases, global warming, energy, pE/pH, gas laws, redox cycling of elements, organic matter, chemistry of drinking and waste waters, biocides, and green chemistry.

Quantitative Analysis (CHM 3120) 2 credits
Prerequisites: CHM 2045, 2045L, 2046, 2046L; Corequisite: CHM 3120L
Principles of analysis; gravimetric, volumetric and instrumental methods.

Quantitative Analysis Lab (CHM 3120L) 2 credits
Prerequisite: CHM 2045, 2045L, 2046, 2046L; Corequisite: CHM 3120
Experiments in volumetric, gravimetric, and instrumental methods of analysis.

Introduction to Physical Chemistry (CHM 3400) 3 credits
Prerequisite: CHM 2046
Principles of physical chemistry with special attention to applications in earth science and oceanography. For students in earth sciences, oceanography, and engineering. This course is also intended for B.A. candidates in Chemistry.

Physical Chemistry 1 (CHM 3410) 3 credits
Prerequisites: CHM 2211 with minimum grade of "C" and 8 credits of physics
Corequisite: CHM 3410L
An introduction to theories of the states of matter, thermodynamics, phase and chemical equilibria, electrochemistry, kinetics and factors affecting reactivity and statistical thermodynamics.

Physical Chemistry 1 Lab (CHM 3410L) 2 credits
Corequisite: CHM 3410
Experiments in physical chemistry.

Physical Chemistry 2 (CHM 3411) 3 credits
Prerequisite: CHM 3410
Corequisite: CHM 3411L
Introduction to quantum chemistry, a description of quantum mechanics (QM) and Schrodinger equation, application of QM to rotational/vibrational motions and electronic spectroscopy, utilization of QM to describe atomic/molecular orbitals, structures and bonding.

Physical Chemistry 2 Lab (CHM 3411L) 2 credits
Corequisite: CHM 3411
Advanced experiments in physical chemistry.

Inorganic Chemistry (CHM 3609) 3 credits
Prerequisite: CHM 2210; Corequisite: CHM 3609L
A study of periodicity in the chemistry of the elements, descriptive inorganic chemistry, synthesis of inorganic compounds. For B.A. candidates in Chemistry.

Inorganic Chemistry Laboratory (CHM 3609L) 1 credit
Corequisite: CHM 3609
Experiments in inorganic chemistry.

Cooperative Education - Chemistry (CHM 3949) 1-3 credits
Grading: S/U

Bioanalytical Instrumentation (CHM 4139) 2 credits
Prerequisites: CHM 3120, BCH 3033, and either PHY 2049 or PHY 2054
Corequisite: CHM 4139L
An introduction to the theory, design, and operation of advanced instrumentation currently used in research and quality control/quality assurance laboratories for the analysis and characterization of biomolecules. Topics include spectroscopic techniques, separation techniques, electrochemical methods, and statistical treatment of data.

Bioanalytical Instrumentation Lab (CHM 4139L) 2 credits
Prerequisites: CHM 3120L, BCH 3033, and PHY 2049L
Corequisite: CHM 4139
Advanced experiments in the isolation, analysis, and characterization of biomolecules using spectroscopic, chromatographic, and electrochemical methods.

Organic Chemistry 3 (CHM 4220) 3 credits
Prerequisite: CHM 2211L
Corequisite: CHM 3410
An in-depth study of a wide variety of organic reactions drawing on both valence bond and molecular orbital theories to explain reactivity. Strong emphasis on curved-arrow mechanisms.

Organic Spectroscopy (CHM 4230C) 3 credits
Prerequisites: CHM 2210 and CHM 2211
This course aims at presenting an introduction to the techniques used to characterize mono- and di-functional organic molecules.

RI: Introduction to Drug Design (CHM 4273) 3 credits
Prerequisite: CHM 2210 or BCH 3033 
Basic principles of organic chemistry and biochemistry vital to drug design and drug action are the focus of this course with use of important drugs as examples. The course is further enhanced with student case projects with the goal of encouraging creative-and-critical thinking. This is a research-intensive (RI) course.

Introduction to Drug Development (CHM 4274C) 3 credits
Prerequisite: CHM 2211
This course provides the basics in U.S. FDA drug regulations, facilities and process qualifications and the processes involved in drug discovery and development. Students learn how specific activities fit into the overall scheme of drug development and evaluate the impact of each activity on the overall progression of a new drug candidate. The principles of good documentation practices and basic analytical assays are introduced by hands-on activities.

Introduction to Drug Formulation (CHM 4276C) 3 credits
Prerequisites: CHM 2211 and CHM 4274C
This course provides an introduction to drug formulation. Students learn about drug discovery, pharmacology, toxicology and formulation. Students are introduced to different forms of drug formulation, various routes of administration and assays to analyze these dosage forms. A laboratory portion is included that involves analytical assays for suspensions and solid dosage forms.

Medicinal Chemistry (CHM 4292) 3 credits
Prerequisites: BCH 3033 and CHM 2211 with grades of "C" or higher
This course provides a comprehensive and balanced introduction to medicinal chemistry beginning with fundamental principles and progressing to principal methods used in drug design.

Introduction to Chemical Biology (CHM 4300) 3 credits
Prerequisites: BCH 3034 and CHM 2211
A comprehensive introduction to the origins and emerging frontiers of chemical biology. This course develops the fundamental chemistry of molecules found in nature, a quantitative description of their interaction with themselves and each other and subsequent effects on biological function. Topics include protein design, molecular evolution, chemical genetics, metabolic engineering and methods in genomics and proteomics research.

RI: Structural Biochemistry (CHM 4350) 3 credits
Prerequisite: BCH 3033 with minimum grade of "C"
Course emphasizes a computer-based approach to teaching structural biochemistry. It uses hands-on experience to develop essential skills for understanding relationships between structure and function of biomolecules. State-of-the-art software for visualization, manipulation and simulation of various biomolecules is used throughout. This course contains an assignment or multiple assignments designed to help students conduct research and inquiry at an intensive level. This is a research-intensive (RI) course.

Materials Chemistry (CHM 4714) 3 credits
Prerequisite: CHM 2210
An introduction to solid-state and inorganic materials chemistry. Preparative techniques and physical methods of characterization are discussed, particularly X-ray diffraction. Semiconductors, carbon-based electronics, nanomaterials, etc. are discussed in context with their structures and optical, magnetic and conductive properties.

Directed Independent Study (CHM 4905) 1-4 credits
Grading: S/U

Directed Independent Research in Chemistry (CHM 4915) 1-3 credits
Students work with research mentors to conduct research and inquiry in Chemistry. Requirements for the course and the criteria for evaluation are agreed upon by the mentor and student.

Directed Independent Research in Chemistry (CHM 4916) 0-3 credits
Students work with research mentors to conduct research and inquiry in Chemistry. Requirements for the course and the criteria for evaluation are agreed upon by the mentor and student.  Grading: S/U

Senior Seminar (CHM 4930) 1 credit

Special Topics (CHM 4933) 1-4 credits

Chemistry Study Abroad (CHM 4957)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

RI: Honors Thesis in Chemistry (CHM 4972) 2 credits
Prerequisites: Students must have completed two semesters of CHM 4905 with grade of "B+," have maintained an overall Chemistry GPA of 3.3 and obtain permission of instructor
This research intensive (RI) course provides the opportunity for in-depth, independent undergraduate research. This includes all aspects of the research process: development of a research question and the methods or experimental procedures utilized to study that question, how to conduct scientific experiments, data analysis and interpretation, including scientific technical writing. Students gain experience communicating the results of their research project in the form of an undergraduate thesis.

Chemistry and Biochemistry Graduate Courses

Advanced Biochemistry (BCH 6740) 3 credits
Prerequisite: Graduate standing
Principles of biomolecular structure determination by spectroscopic methods. Enzyme kinetics. Transport mechanisms across membranes. Molecular physiology and molecular genetics.

Advanced Topics in Biochemistry (BCH 6930) 3 credits
Prerequisite: Graduate standing
Special topics in biochemistry.

Organic Chemistry 3 (CHM 5224) 3 credits
Prerequisite: Graduate standing
A detailed overview of organic reaction mechanisms utilizing valence bond and molecular theories and kinetic analysis.

Materials Chemistry (CHM 5716) 3 credits
Prerequisite: College of Science or College of Engineering graduate students only
An introduction to solid-state and inorganic materials chemistry. Preparative techniques and methods of characterization are discussed, particularly X-ray diffraction. Semiconductors, carbon-based electronics, nanomaterials, etc. are discussed in context with their structures and optical, magnetic and conductive properties. A crystallography workshop is included.

Introduction to Chemical Research (CHM 5944) 1 credit
Intended to be an introduction of new graduate students to the research interests of the department faculty. Departmental procedures and organizations will be discussed. Philosophical consideration of doing scientific research will also be discussed. All new graduate students are expected to take this course.  Grading: S/U

Bioanalytical Methods and Applications (CHM 6137) 2 credits
Prerequisite: Graduate standing
Analytical chemistry deals with methods and instruments that can determine the quality and the quantity of matters of interest. For biological samples, special care is necessary to deal with their fragility, heterogeneity and complexity. This course covers the operating principles and practical application of modern methodologies and technologies used for chemical analysis for biological samples. Research design, sample isolation, quantification, data analysis and result interpretation are discussed.

Instrumentation (CHM 6157) 3 credits
Prerequisite: Graduate standing
An overview of modern instrumental techniques used in various areas of chemistry (analysis, characterization, identification). Topics include spectroscopy, chromatography, electrochemistry, theory and applications.

Advanced Organic Chemistry (CHM 6225) 3 credits
Prerequisite: Graduate standing
Introduction to the concepts of modern physical organic chemistry. Elementary molecular orbital theory and applications. Methods for determining reaction mechanisms. Linear free energy relationships. Solvolysis reactions.

Advanced Drug Development (CHM 6277C) 3 credits
This course provides the overview on processes involved in drug discovery and development. The principles of current good manufacturing practices (cGMPs), quality control and quality assurance are covered. This course also gives an overview of U.S. Food and Drug Administration (FDA) regulations and intellectual property rights. Experts in drug development and regulation present lectures on these topics. A laboratory portion is included that involves the process of analytical method development, validation, stability analysis and the associated protocols and reports.

Drug Design (CHM 6278) 3 credits
Basic principles of organic chemistry and biochemistry vital to drug design and drug action are the focus of this course with use of clinically important drugs as examples. Students who complete this course successfully will be proficient in understanding the processes involved in drug discovery and development from lead identification to introduction into clinical studies.

Advanced Drug Formulation (CHM 6279C) 3 credits
This is an advanced course offering in-depth coverage of drug formulation. The course helps in understanding pre-clinical formulation; pharmacokinetic, stability and compaction studies; and formulation of various types of dosage forms.

Structural Biochemistry (CHM 6351) 3 credits
Prerequisite: CHM 2210 with minimum grade of "C"
Emphasizes a computer-based approach to teaching structural biochemistry. It uses hands-on experience to develop essential skills for understanding the relationships between structure and function of biomolecules. Classes are held in computer labs. State-of-the-art software for visualization, manipulation and simulation is used throughout.

Advanced Topics in Organic Chemistry (CHM 6380) 3 credits
Synthesis, reaction mechanisms, and physical organic chemistry.

Medicinal Chemistry (CHM 6428) 3 credits
Prerequisites: CHM 2211, BCH 3034, CHM 3411, all with minimum grade of "C"
This course provides a comprehensive and balanced introduction to medicinal chemistry beginning with fundamental principles and progressing to principal methods used in drug design such as quantitative structure-activity relationships, computer-aided drug design and combinatorial chemistry.

Kinetics and Energetics of Reactions (CHM 6720) 3 credits
Prerequisite: Graduate standing
A detailed look at reactions of chemical elements and molecules, their rates and thermodynamics. Chemical kinetics, rate laws, collision theory and transition state theory. Reaction and structural dynamic. Thermochemistry, properties of ideal and non-ideal systems. Chemical equilibria.

Synthesis and Characterization (CHM 6730) 3 credits
Prerequisite: Graduate standing
Synthetic procedures and methods for preparation of inorganic, organic, and polymeric compounds, with special attention to recent developments. Methods of characterization and identification of chemical compounds, with emphasis on physical methods.

Topics in Chemistry (CHM 6830C) 1-4 credits

Graduate Research (CHM 6918) 1-12 credits
Prerequisite: Permission of instructor
Supervised research in chemistry.  Grading: S/U

Graduate Seminar (CHM 6935) 1 credit
Non-thesis topic.

Graduate Seminar (CHM 6936) 1 credit
Thesis research seminar.

Current Topics in Bioanalysis (CHM 6937) 1 credit
Analytical chemistry deals with methods and instruments that can determine the quality and the quantity of matters of interest. For biological samples, special care is necessary to deal with their fragility, heterogeneity and complexity. This course covers the operating principles and practical application of modern methodologies and technologies used for chemical analysis for biological samples. Research design, sample isolation, quantification, data analysis and result interpretation are discussed. 

Master's Thesis (CHM 6971) 1-6 credits
Grading: S/U

Advanced Research in Chemistry (CHM 7978) 1-9 credits
Prerequisite: Admission to doctoral candidacy
Focused, relevant research in the student's course of study in the Ph.D. program in chemistry. This course requires oversight by the student's dissertation advisor.  Grading: S/U

Dissertation (CHM 7980) 1-12 credits
Prerequisite: Admission to doctoral candidacy
Grading: S/U

Chemistry for Environmental Scientists (CHS 6611) 3 credits
Prerequisites: Two semesters college chemistry with lab, graduate standing
Course is designed for environmental scientists and requires minimal chemical training (one year of general chemistry with a "C" or better or permission of instructor). Introductory chemical basics are covered to lay a foundation for the remainder of the course. Atmospheric chemistry (global warming, ozone layer) are covered. However, aquatic chemistry and its effects on biotic communities and humans are emphasized.

Complex Systems and Brain Sciences

Graduate Courses

Nonlinear Dynamic Systems (ISC 5453) 3 credits
Introduction to nonlinear dynamical systems in an interdisciplinary setting. Topics covered include one-, two- and three-dimensional ordinary differential equations, bifurcations, one- and two-dimensional maps, iterated function systems, time scale separation and self-organization and elementary stochastic systems.

Cognitive Neuroscience (ISC 5465) 3 credits
An interdisciplinary survey of the neural basis of cognitive functions such as perception, attention, memory, and language.

Directed Independent Study (ISC 5908) 1-3 credits
Prerequisite: Permission of Instructor
Directed independent study in complex systems and brain sciences for undergraduate and graduate students.

Special Topics (ISC 5930) 3 credits
Special topics course in complex systems and brain sciences for both undergraduate and graduate students. Specific title, content, and textbook(s) vary with topic.

Methods in Complex Systems (ISC 6450) 3 credits
Classical statistical analysis and inference of linear systems and how those statistical methods and analysis procedures differ for non-linear complex systems. Topics include fractals, chaos, neural networks, and self-organizing critical systems.

Computational Neuroscience 1 (ISC 6460) 3 credits
Prerequisite: Permission of instructor
Covers the basics of computational neuroscience and introduces many research topics of both biological and artificial neural networks.

Directed Independent Study (ISC 6908) 1-3 credits
Grading: S/U

Introduction to Complex Systems Tools (ISC 6925) 3 credits
Objective of this "boot camp" is to provide students with the prerequisites-some conceptual background and sufficient working knowledge of mathematics-necessary to master the mathematically-based graduate courses at the Center for Complex Systems and Brain Science.

Special Topics (ISC 6930) 1-3 credits
Discussion of special topics in complex systems and brain sciences.

Seminar in Attention (ISC 6932) 3 credits
Prerequisite: Permission of instructor
This course examines attention and its role in perception, cognition, and action. Students read recent research articles dealing with significant issues in this area.

Proseminar on Research in Complex Systems (ISC 6937) 1-3 credits
Introductory survey course of research in complex systems and brain sciences at Florida Atlantic University, aimed at first semester graduate students.

Advanced Research (ISC 7978) 1-9 credits
Prerequisite: Admission to Ph.D. degree program
Focused, relevant research in the student's course of study in the Ph.D. degree program in complex systems and brain sciences. This course requires oversight by the student's dissertation advisor.  Grading: S/U

Dissertation (ISC 7980) 1-15 credits
Grading: S/U

Dynamical Systems and Chaos 1 (MAP 6211) 3 credits
(See Mathematics and Statistics courses, this section)

Developmental Neurobiology (PSB 6515) 3 credits
Cellular and Molecular Neuroscience (PSB 6345) 3 credits
Systems and Integrative Neuroscience (PSB 6346) 3 credits
Special Topics in Behavioral Neuroscience (PSB 6930) 3 credits
Special Topics (PSY 5930) 3 credits
(See Psychology courses, this section)

Environmental Sciences

This interdisciplinary master's program draws on several disciplines in the Charles E. Schmidt College of Science. See the Interdisciplinary Programs section in the College of Science Programs section.

Exercise Science and Health Promotion

Undergraduate Courses /link to graduate courses

Exercise Physiology  1  (APK 4110) 3 credits
Prerequisites: BSC 2085, BSC 2085L, BSC 2086, BSC 2086L, CHM 2045 and CHM 2045L,  all with minimum grades of "C" 
Corequisite: APK 4110L
A lecture course dealing with the physiological responses and adaptations to acute and chronic forms of exercise. Areas of emphasis include: energy metabolism, cardiovascular, physiology, pulmonary function, muscular system, body composition and aging.

Exercise Lab Techniques  (APK 4110L) 1 credit
Prerequisites: BSC 2085, 2085L, 2086, 2086L, CHM 2045, 2045L, HSC 2100, all with minimum grades of "C" 
Corequisite: APK 4110
The application of physiological principles toward understanding the physiological adjustments that occur to maintain homeostasis in the exercising human.

Exercise Physiology 2 (APK 4134) 2 credits
Prerequisites: APK 4110 and 4110L with minimum grades of "C"
Course furthers the underlying knowledge of physiological function as it pertains to exercise. Perspectives and data related to environmental aspects of exercise are explored, with special attention on training at altitude and the effects of microgravity on muscle loss and bone density.

Health, Fitness for Life (HSC 2100) 2 credits
A study of the strategies and techniques of healthful living. A wellness model will provide the framework for this course. Personal health and fitness appraisals will be conducted.

First Aid and CPR (HSC 2400) 2 credits
Study of the techniques of emergency first aid, cardiopulmonary resuscitation and accident prevention. Emphasis will be placed on examining the interrelationships among human behavior of the environment and accidents. Opportunity exists for each student to earn First Aid, CPR, and AED certification.

Perspectives in Health (HSC 3102) 3 credits
Prerequisite: Junior standing or higher and HSC 2100 with a grade of "C" or better
A study of the major health and wellness issues facing humankind. Emphasis will be placed on examining appropriate health enhancement strategies.

Stress Management (HSC 4104) 3 credits
Prerequisite: Junior standing or higher
The course includes a comprehensive study of the scientific foundations of stress. These include lifestyle conditions and their relationship to disease, recognizing stressors in various settings and stages of life, behavioral change interventions, and stress management techniques. This course examines and applies stress management concepts based on individual response and adaptation to internal and external influences.

Sexual Health Peer Education (HSC 4133) 3 credits
Students gain knowledge and professional presentation skills related to sexual health. By presenting learned sexual health information in front of various academic audiences, students demonstrate their understanding of the concepts.

Weight Management (HSC 4139) 3 credits
Prerequisite: Junior standing or higher
Course examines the different aspects of weight management. Weight loss and weight gain methods are discussed and insight is provided into the healthy approach of weight loss and weight gain. A variety of commercial diets are explored and critiqued.

Substance Abuse (HSC 4143) 3 credits
Prerequisite: Junior standing or higher
The course examines the different aspects of substance abuse on personal health, identifies factors associated with substance use and abuse, describes the signs and symptoms of possible substance use and abuse, and identifies methods of prevention and control.

Health Promotion (HSC 4581) 3 credits
Prerequisite: HSC 2100 with a grade of "C" or better
A study of the fundamental concepts of health education and health promotion. Emphasis will be given to the process and practice of health promotion and the application of related health behavioral theories and models.

Pilates Exercise (PEM 1127) 2 credits
A comprehensive exercise course designed to instruct students to the exercise techniques and philosophy of Joseph H. Pilates.

Weight Training (PEM 1130) 2 credits
Course introduces students to the basic fundamental and scientific principles of weight training and conditioning, as well as to improve overall fitness level and skill. Students learn to weight lift independently, while improving at their own pace to reach their fitness goals.

Jogging (PEM 1145) 2 credits
This course provides basic knowledge regarding proper jogging techniques, training, and overall physical fitness. Areas covered include clothing/shoes, training techniques, walking injuries, importance of heart rate, and psychological barriers to jogging. Importance of individual fitness, primarily in respect to cardiovascular endurance, will be emphasized with flexibility and strength.

Yoga (PEM 2121) 1 credit
This course is designed to introduce students to yoga. The class includes theory and physical practice of body position, breathing and meditation.

Swimming (PEN 2121) 1 credit
Instruction and practice in the elementary forms of swimming.

Swim Fitness (PEN 2172) 1 credit
Prerequisite: Ability to swim 25 yards (any stroke)
Introduction of the principles and techniques of swimming for fitness enhancement.

Applications of Training Physiology 1 (PEP 3192) 3 credits
Prerequisites: HSC 2100, PSY 1012 with grades of "C" or better or equivalent
Prerequisites or Corequisites: APK 4110 and APK 4110L
This course bridges the gap between science and practical application to gain a better understanding of how the body works most efficiently. This includes understanding functional anatomy, movement, screens/assessments, corrective exercises, program designs and leadership roles for various types of exercise styles/programs.

Exercise Leadership 2 (PEP 3136) 3 credits
Prerequisites: HSC 2100, PSY 1012 with grades of "C" or better
Prerequisites or Corequisites: APK 4110 and APK 4110L  with grades of "C" or better
Methods and techniques in the use of various weight training equipment and machines. Scientific principles of strength training, program development, exercise leadership and supervision of weight training and other group exercise activities are included.

Applications of Training Physiology 2  (PEP 4138) 3 credits
Prerequisites or Corequisites: APK 4134, PEP 3192 and PET 4550 with grades of "C" or better
Course continues to bridge the gap between scientific principles and application into practice. Program design and applied principles of bodily systems (i.e., muscle and endocrine) are discussed in a manner that can practically improve athletic performance.

Neurophysiology of Human Movement  (PET 3050) 3 credits
Prerequisites: BSC 2085, 2085L, 2086, 2086L, PSY 1012 with grades of "C" or better or permission of instructor
A study of nervous system function across molecular, cellular and systems levels to explain involuntary and voluntary human movement.

Introduction to Health and Exercise Science (PET 3102) 3 credits
Prerequisites: Exercise Science and Health Promotion majors only, minimum, Junior standing or higher
An introductory course designed to examine the philosophical, historical, psychosocial origin of the fields of exercise science and health promotion. Current issues and future directions will be explored.

Nutrition in Health and Exercise (PET 3361) 3 credits
Prerequisite: Junior standing or higher
Study of the nutritional needs of the athlete and active person. Emphasis includes: fat, carbohydrate, protein, vitamin, mineral and water needs of the active person; energy metabolism, food and fluid intake prior to, during, and after exercise; nutritional management of anemia and diabetes; nutrient needs of the young and old athlete.

Tactical Strength and Conditioning (PET 4093) 3 credits
This course addresses the unique training and conditioning requirements of tactical athletes with an emphasis on the physiological, metabolic and biomechanical demands related to these occupations. This class prepares students for NSCA's TSAC-F certification and employment within the tactical strength and conditioning field.

Obesity: Biological, Psychological and Cultural Factors (PET 4263) 3 credits
Focuses on different influences such as biology, psychology and culture in weight gain eventually leading to obesity. Also emphasizes the different approaches and settings of prevention and intervention in weight loss and weight loss maintenance (e.g., physical activity, dietary and pharmacological).

Kinesiology (PET 4330C) 4 credits
Prerequisites: BSC 2085, 2085L, 2086, 2086L with grades of "C" or better
A study of functional anatomy and elementary biomechanics. Emphasis will be placed on the analysis of the skeletal, muscular and nervous systems and the biomechanical factors associated with efficient motor performance.

Biomechanics (PET 4340C) 3 credits
Prerequisites: APK 4110, APK 4110L, BSC 2085, BSC 2085L, BSC 2086, BSC 2086L, all with grades of "C" or better
A study of the biomechanics of sport and exercise. Emphasis will be placed on an analysis of efficiency in human movement.

Management Principles in Exercise Science and Health Promotion (PET 4404) 3 credits
Prerequisite: PET 3102 with a grade of "C" or better
Study of management principles in the field of exercise science and health promotion. Emphasis is placed on entrepreneurial skills, social media marketing, technology and financial management. Industry trends, market analysis, modern practices and development strategies related to creating a web-based fitness/wellness business are covered.

Exercise Testing and Prescription (PET 4550)  4 credits
Prerequisite: HSC 2100, APK 4110, APK 4110L, BSC 2085, BSC 2085L, BSC 2086, BSC 2086L, CHM 2045, CHM 2045L, all with grades of "C" or better
A practical course in exercise testing and programming for apparently healthy individuals and those with controlled disease including program design, preset health status assessment, protocols for the evaluation of cardiovascular functions, aerobic capacity, muscular fitness, pulmonary function and body composition, basic electrocardiography, interpretation of test results, and handling emergency situations.

Fitness Assessment and Exercise Prescription (PET 4551) 3 credits
Prerequisites: HSC 2100, APK 4110, APK 4110L with grades of "C" or better or equivalent
Introduces techniques appropriate for screening for exercise, health appraisal, assessment, and exercise prescription for apparently healthy individuals or those who have controlled disease.

Exercise Testing and Prescription for Special Populations (PET 4552) 3 credits
Prerequisites: APK 4110, APK 4110L, PEP 3192, PET 4551 with grades of "C" or better or permission of instructor
Focuses on exercise programs specifically designed for special populations including cardiac rehabilitation. Includes pharmacology, electrocardiography, pathophysiology of chronic diseases, exercise testing, prescription, and leadership for special cases.

Directed Independent Study (PET 4905) 1-3 credits

Special Topics (PET 4930) 1-3 credits
Topics not covered by other courses. Topics will vary.

Internship (PET 4946)  3-9 credits
Prerequisite: All ESHP program course work and permission of internship coordinator
Supervised field experience in one or more of the following professional settings: recreation, administration, physical fitness leadership, health promotion, sports management. Supervision is provided by both the cooperating agency and university.

Practicum in Exercise Science and Health Promotion (PET 4947) 3 credits
Prerequisites: APK 4110 and HSC 2400 with grades of "C" or better
Introduction to field experiences in exercise science and health promotion.

Exercise Science and Health Promotion Graduate Courses

Advanced Exercise Physiology 1 (APK 6111) 3 credits 3 credits
Prerequisite: APK 4110
An advanced study of human physiology and its interactions with physical activity and training. Emphasis will be placed on the study of the mechanisms underlying the acute and chronic responses to stress.

Advanced Exercise Physiology 2 (APK 6116) 3 credits
Prerequisite: APK 4110 or equivalent
A comprehensive examination of the major organ systems contributing to the physiological response to exercise, both acute and chronic. Specifically, this course focuses on three of these systems: cardiovascular, pulmonary, and neuromuscular.

Drug Abuse Behavior (HSC 5156) 3 credits
Drug abuse behavior is examined from the biological, psychological and sociological perspectives. Epidemiological patterns are studied to identify contributory causal relationships in drug use behavior. Various interventions to control, prevent and manage the behavior are examined and evaluated to identify effective behavior change strategies.

Chronic Stress and Population Health (HSC 5177) 3 credits
Exploration of a science-based study of stress as it relates to the mechanisms of psychological stressors to induce chronic health issues. In addition, issues related to the measurement, prevalence and intervention strategies are discussed. Epidemiological data are examined to determine disproportionate prevalence rates of health status among various population groups.

Human Obesity (HSC 5178) 3 credits
This course focuses on advanced topics, including various factors contributing to weight gain that eventually leads to obesity in humans. Topics include the influences of biology, psychology and culture. This course also emphasizes the different research and evidence-based approaches and settings of prevention and intervention in weight loss and weight loss maintenance. Finally, the lectures, discussions and projects (critiques of articles and nutritional/behavioral assessments) given in this course enable students with advanced theoretical and practical knowledge to understand and evaluate obesity prevention interventions.

Personal and Community Health (HSC 5203) 3 credits
Health problems and issues relating to the individual and to the community.

Teaching Health in Elementary School (HSC 5315) 3 credits
Curriculum, theory, and practices in teaching health in the elementary school.

Advanced Concepts in Health Promotion (HSC 5587) 3 credits
Analysis of the growing body of knowledge concerning health promotion and health behavior. Concepts of theory, research and practice are analyzed and used as a framework for advanced investigative study.

Evaluation of Health Promotion and Health Education Programs (HSC 6115) 3 credits
Introduces procedures and skills essential to the evaluation of health promotion and health education programs in a variety of settings. Major areas include selecting evaluation design, issues, and steps involved in conducting an evaluation and communicating evaluation results.

Needs Assessment and Program Planning in Health Promotion (HSC 6248) 3 credits
Provides students with the practical knowledge and skills to assess health resources and needs and to develop and implement health promotion programs in different settings.

Epidemiological Basis of Health (HSC 6505) 3 credits
A study of the human and environmental factors that enhance or diminish health. An examination of the strategies for health enhancement will be emphasized.

Health Behavior, Health Education, and Health Promotion (HSC 6585) 3 credits
Provides the fundamental concepts of health behavior within social and psychological contexts. Focus is on applying health behavior theories to development of effective health promotion programs. Health education skills addressing problems relating to lifestyle and physical health will be introduced.

Advanced Sport Nutrition (HUN 6247) 3 credits
Prerequisite: PET 3361 or equivalent
An advanced study of the role of nutrition as a means to enhance performance in exercise and sport. Topics include principles of energy metabolism, nutrients in their use during exercise, regulation of metabolism by macro and micro nutrients and their role in weight control with athletes. The validity and safety of proposed ergogenic aids are also explored.

Exercise Neuroscience  (PET 5077) 3 credits
Prerequisite: APK 4110
A team-taught course highlighting the results of clinical exercise trials targeting the age-related loss in neuroprotective mechanisms and skeletal muscle function.

Strength and Conditioning Program Design (PET 5391) 3 credits
Prerequisite: PEP 3136 or equivalent
Course teaches students how to design strength and conditioning programs for heterogeneous populations. Development of these programs is through the advanced periodized manipulation of acute training variables. The course covers high-level sport-specific exercise prescription that aids injury prevention and performance enhancement.

Advanced Exercise Testing and Prescription (PET 5521) 3 credits
A study of the common techniques and equipment used in the exercise science field. Practical applications will be examined and discussed. Areas of emphasis will include electrocardiography, blood pressure, body composition, oxygen consumption, and respiratory measures.

Special Topics (PET 5930) 1-4 credits
Special topics in exercise science and health promotion.

Practical Applications in Exercise Science and Health Promotion (PET 5947) 1-3 credits
Prerequisite: PET 4550, APK 6111, or permission of instructor
Supervised clinical experience in fitness development and health enhancement education.

Behavior and Performance in Sport and Exercise (PET 6216) 3 credits
A study of the social and psychological variables affecting sport and exercise performance. Emphasis will be placed on topics such as lifestyle assessment, theories of play, stress, motivation, aggression, and group cohesion.

Functional Biomechanics (PET 6346) 3 credits
Prerequisite: PET 4330C or equivalent
Students gain knowledge of biomechanical measurement techniques involving movement and technique analysis, force-posture relationships, investigation of dynamic muscular parameters, and electromyography. Students apply the principles of biomechanics in an analysis, study, and reporting of selected exercise and sports movements.

Skeletal Muscle Physiology (PET 6382) 3 credits
Prerequisite: APK 4110 or permission of instructor
This course explores skeletal muscle plasticity and adaptation to exercise and disease. Focus is on pre-clinical rodent models and humans, but also other experimental systems where appropriate. Emphasis is placed on skeletal muscle responses occurring at the cell and molecular level.

Research and Evaluation (PET 6505C) 3 credits
A study of basic and applied research principles and methodology and their application to the testing and evaluation of physical performance and associated behaviors in recreation and athletics. This course serves as a capstone experience, which includes a mock research proposal (three chapters of a master's thesis) and a video presentation.

Directed Independent Study (PET 6905) 1-5 credits

Current Issues in Exercise Science and Wellness Education (PET 6930) 3 credits
This course deals with the study of special topics of interest to the exercise science and wellness education fields. Topics will vary.

Master's Thesis (PET 6971) 1-6 credits

Entrepreneurship in Health/Fitness Industry (SPM 6116) 3 credits
Study of the management process of health/fitness programs in corporate, community, and commercial settings.

Educational Statistics (STA 6113) 3 credits
(See Educational Leadership and Research Methodology courses in the College of Education.)

Geosciences/Geography

Undergraduate Courses /link to graduate courses

Environmental Issues in Atmospheric and Earth Science (ESC 3704) 3 credits
Investigation of the complex interactions between humans and their environment. Environmental problems encompassing selected aspects of the atmosphere, hydrosphere, biosphere, and lithosphere: including deforestation, desertification, air and water quality, and processes of land degradation.

Environmental Science and Sustainability (EVR 1001) 3 credits
This course is a survey of basic chemical, biological and physical principles of environmental science and their applications to environmental issues. This course is appropriate for students in a wide range of disciplines or programs. This is a General Education course. 

Climate Change: The Human Dimensions (EVR 1110) 3 credits
Anthropogenic climate change is often thought of from a scientific perspective. However, because it is human created, we also need to understand the human dimensions, such as how people (not only scientists) understand climate, how people affect climate, and how climate affects people. This course provides an inspirational perspective on human behavior, leaving students with a refined understanding of and appreciation for our common futures. This is a General Education course.

Environment and Society (EVR 2017) 3 credits
Introduction to the study of major environmental problems and issues confronting modern society: economic and ecosystem concepts, population patterns and dynamics, resource use and misuse, environmental quality, and environmental citizenship. This is a General Education course.

Climate Change: Myths, Realities and Solutions (EVR 3114) 3 credits
In this course, students learn the science behind the changing climate. Students also learn the common arguments and how to discern the truth. Finally, students learn about how resilient communities can be built that not only mitigate and adapt, but also thrive.

Hazards, Climate and People (EVR 4112) 3 credits
This course introduces the interaction between society and natural hazards with special consideration given to perceptions of risk, vulnerability, preparedness and recovery. Additionally, the course explores climate change and uncovers its role as related to the magnitude and frequency of certain hazards. This is an Academic Service Learning (ASL) course.

Introduction to Coastal Freshwater Resources (EVR 4453) 3 credits
In this course, students explore the intricacies of freshwater resources in coastal areas, examine the effects of natural and human activities on these resources and delve into the scientific and technological aspects associated with water resource development and conservation. Coastal freshwater systems in Florida, in particular, face numerous challenges such as global warming, sea-level rise, hurricane flooding, droughts, over-pumping, seawater intrusion and more. 

World Geography (GEA 2000) 3 credits
Examination of contemporary world problems through geographical analysis of physical, economic, social, and political systems of major countries and world regions. Credit will not be given for both GEA 2000 and GEA 3003. This is a General Education course.

Geography Study Abroad (GEA 2952)  1-6 credits
Prerequisite: Sophomore standing and permission of instructor
Credit for enrollment in approved study abroad programs.

Geography of the Developing World (GEA 3003) 3 credits
Survey of the physical, economic, political, and social systems that characterize the lesser developed nations of the world. Focus on problems affecting Latin America, Africa, the Middle East, South Asia, and China. Credit will not be given for both GEA 3003 and GEA 2000.

RI:  Human-Environment Interactions in South Florida (GEA 4275) 3 credits
This course is for Geography majors and majors in other related fields. Methods covered in previous Geosciences courses are emphasized in a collaborative learning environment. Critical and systematic thinking skills are used in a series of case-study projects. This is a research-intensive (RI) course.

Culture and Environment: Latin American and the Caribbean (GEA 4405) 3 credits
This course explores Latin American and Caribbean environments and peoples. Particular attention is paid to natural regions, culture, colonization, religion, politics, agriculture, art, and globalization. Ideas and concepts are illustrated with PowerPoint presentations and videos.

Geography Study Abroad (GEA 4957) 1-6 credits
Prerequisite: Sophomore standing and permission of instructor
Credit for enrollment in approved study abroad programs.

Introduction to Physical Geography (GEO 2200C) 3 credits
The natural environment and its physical patterns - an introduction to landforms, soils, water, vegetation, and other physical features of the earth. Laboratory work.

Sea-Level Rise: Impacts and Responses (GEO 3342) 3 credits
This course surveys causes and impacts of climate change and sea-level rise and the resulting impacts on metropolitan South Florida. Critical issues related to climate change and sea-level rise are examined.

Quantitative Methods (GEO 4022) 3 credits
Prerequisite: STA 2023 or equivalent
Introduction to quantitative methods used in regional, economic and geographic analysis.

Water Resources (GEO 4280C) 3 credits
Prerequisite: GEO 2200C or GLY 2010C or equivalent
Distribution, management, and use of water. Topics include agricultural and personal water use, wetland degradation and pollution.

Biogeography (GEO 4300) 3 credits
Biogeography is the study of past and present distribution of plants and animals. The course combines the disciplines of biology and ecology with spatial and temporal aspects of geography. Class will be taught through lecture, in-class laboratory sessions with homework assignments, and field trips to local sites.

American Cultural Landscape (GEO 4422) 3 credits
An examination of the cultural, economic and political forces that have given shape to the American landscape.

Tourism and Commercial Recreation (GEO 4542) 3 credits
Geographic analysis of tourism and commercial recreation. Emphasis will be placed on spatial variation in tourist flows and tourism development, and the cultural, environmental, and economic impacts of tourism.

Urban Geography (GEO 4602) 3 credits
Pattern of urban settlements. Types, functional areas, and the influence of distribution upon social, political and economic development. Emphasis on transportation, land use and the planning process.

Transportation and Spatial Organization (GEO 4700) 3 credits
Transportation development, network configuration and allocation of transport flows. Analytical problems.

Directed Independent Study (GEO 4905) 1-3 credits
Prerequisite: Permission of instructor
Grading: S/U

Directed Independent Research in Geosciences (GEO 4915) 1-6 credits
Students work closely with research mentors to conduct research and inquiry in Geosciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Geosciences (GEO 4916) 0-6 credits
Students work closely with research mentors to conduct research and inquiry in Geosciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Geosciences Honors Colloquium (GEO 4920) 1 credit
Prerequisite: Permission of instructor
Exposes undergraduate students in the Honors track in Geography to various research topics and methodologies in the geosciences. Lectures given by a variety of speakers in the academic and professional realms of the geosciences. Repeatable for credit.

Special Topics (GEO 4930) 1-3 credits
Specially arranged programs in remote sensing, GIS, and physical or human geography.

Field Experience (GEO 4948C) 1 credit
Prerequisites: Junior or senior standing; permission of instructor
Direct observation, description, and analysis of selected field sites and associated topics.  Grading: S/U

Introduction to Mapping and GIS (GIS 3015C) 3 credits
Analysis of map properties and use of maps as sources of information. Essentials of location, scale, projection, direction, elevation, and general map elements. Introduction to map making in geographic information systems.

Photogrammetry and Aerial Photograph Interpretation (GIS 4021C) 3 credits
Principles of aerial photography and photogrammetry including the photographic production process, electromagnetic principles, history of aerial photography and aerial platforms, elements of visual image interpretation, and analog and digital (soft copy) photogrammetric methods.

Remote Sensing of the Environment (GIS 4035C) 3 credits
Prerequisite or Corequisite: GIS 3015C or equivalent
Principles of photographic and electromagnetic remote sensing systems which detect, record and measure distributions of natural and cultural phenomena. Interpretation of aerial and orbital imagery for urban and environmental research and planning.

Digital Image Analysis (GIS 4037C) 3 credits
Prerequisite: GIS 4035C or equivalent
Advanced remote sensing covering the analysis of digital satellite imagery of the Earth. Emphasis on the use of computer-based image processing systems.

Principles of Geographic Information Systems (GIS 4043C) 3 credits
Prerequisite: GIS 3015C or equivalent
Basic concepts of geographic information systems. Evaluation of hardware and software components. Examination of data structures, and fundamental GIS functions. Application potential and laboratory experience with selected GIS systems.

Applications in Geographic Information Systems (GIS 4048C) 3 credits
Prerequisite: GIS 4043C or equivalent
Advanced technical, implementation and application issues in geographic information systems. Geocoding, algorithms for 2- and 3-dimensional representations, and system planning and implementation issues.

Web GIS (GIS 4054C) 3 credits
Prerequisite: GIS 4043C or equivalent
This course provides students with a comprehensive and up-to-date overview of Web GIS, including the basic concepts, principles, related fields and frontiers. It also provides the state-of-the-art technical skills to build Web GIS applications and the knowledge needed to choose from various Web GIS development options.

Programming in GIS (GIS 4102C) 3 credits
Prerequisite: GIS 4043C or equivalent
The course introduces students to the basic programming concepts and methodologies for customizing and/or extending the available functions in the cutting edge GISystems and the pertinent statistical data analysis methods.

Spatial Data Analysis (GIS 4115C) 3 credits
Prerequisite: GIS 4043C
This course introduces a variety of spatial quantitative methods commonly used in the GISciences. 

Geospatial Databases (GIS 4118) 3 credits
Prerequisite: GIS 4043C
Geospatial databases provide the functions of storing, managing and querying geospatial data and are essential components of Geographical Information Systems (GIS). This course covers the fundamental principles, techniques and methodologies for designing and implementing a geospatial database and querying and geoprocessing in geospatial databases.

Geovisualization and GIS (GIS 4138C) 3 credits
Prerequisite: GIS 3015C or equivalent
Advanced map design with an emphasis on the visualization of spatial data in a virtual environment. Lab projects include animated maps, fly-through animations, and 3D visualizations.

Mobile GIS and Drone Technology (GIS 4140C) 3 credits
Prerequisite: GIS 3015C with minimum grade of "C"
This course introduces students to essential methods of generating spatial data in the field using mobile GIS and Unmanned Aerial Systems (UAS). The fundamentals of Global Navigation Satellite Systems (GNSS) is covered as will the operation of various UAS, FAA regulations that govern their use and the production of photogrammetric derivatives for subsequent use in GIS.

Weather, Climate and Climate Change (MET 2010) 3 credits
Introduction to the processes of Earth's surface and atmosphere that lead to distinctive weather patterns and climate zones as experienced by humanity. The course examines temperature and pressure, atmospheric circulation, precipitation and storms, the hydrological cycle, global climate and vegetation patterns, air pollution and climate change. This is a General Education course.

Atmospheric Hazards (MET 3052) 3 credits
Prerequisite: MET 2010
This course delivers comprehensive knowledge of atmospheric hazards, emphasizing the physical explanation, historical precedents and the influence of climate change. Through the analysis of diverse case studies, students explore a range of atmospheric hazards including tropical cyclones, severe thunderstorms, tornadoes, droughts, heatwaves, wildfires, winter storms and compound and cascading events where multiple hazards intersect. Special attention is given to the ways in which climate change is altering the frequency and impact of these hazards. 

Tropical Climatology (MET 3112) 3 credits
Prerequisite: MET 2010
This course presents a comprehensive exploration of tropical climatology. The focus is on the fundamental principles governing tropical weather and climate, the processes driving the circulation, severe weather events, and the pivotal role of the tropical climate in shaping global circulation patterns. 

Climate Data Applications (MET 4142) 3 credits
Prerequisite: MET 2010
This course offers a comprehensive introduction to the world of climate data. Students explore the differences between various types of climate data, understand their sources and multiple formats and gain hands-on experience in data handling, visualization and interpretation. With an emphasis on practical applications, students develop basic programming skills (Python) to assess, analyze and utilize climate data effectively for research and decision-making.

Geography Graduate Courses

Environmental Restoration (EVR 6334) 3 credits
Prerequisite: GEO 4300 or PCB 4043, or permission of instructor
Course introduces students to the rapidly expanding practice of restoring degraded ecosystems and landforms through a mixture of lecture, discussion, field visits, and individual research projects.

Restoration Implementation and Management (EVR 6358) 3 credits
Restoration projects require the approval of multiple government agencies and cooperation of affected landowners and stakeholders at every phase. This course covers the legal aspects of government approval, creating communication plans for coalition building and collaboration with stakeholders, conflict resolution and ethics in restoration. The course uses a combination of discussion of academic literature, lecture, case studies and guest speakers, including from state and federal agencies, consulting firms and non-governmental organizations.

Paleoenvironmental Reconstruction (EVR 6931) 3 credits
This seminar broadly examines paleoenvironmental research with a focus on environmental and climate change across the Holocene. Emphasis on the application of proxies and interpreting past human-environment interaction. This seminar broadly examines paleoenvironmental research with a focus on environmental and climate change across the Holocene. Emphasis on the application of proxies and interpreting past human-environment interaction.

Defining and Measuring Global Change Vulnerability (EVR 6938) 3 credits
Prerequisite: Permission of instructor
This seminar introduces graduate students to the concepts and methods associated with scholarly research on global change vulnerability. This emerging literature derives from decades of research on coupled human-environment interactions. The fundamental premise is that there is a reciprocal relationship between people and their biophysical environments.

Human-Environmental Interactions (GEA 6277) 3 credits
This course provides graduate students in geography with an environment to practice the various methods and approaches learned in their graduate program. It uses a multidisciplinary approach to explore diverse aspects of human-environment interactions in a specified region. This is an Academic Service Learning (ASL) course.

Biogeography (GEO 5305) 3 credits
Biogeography is the study of distributions of organisms and the processes responsible for the patterns. This course examines theories concerning spatio-temporal processes and patterns, populations, communities, ecosystems, biodiversity, disturbance, succession, speciation and conservation. Classes are taught by lecture, discussion of academic literature and field-based research at local sites.

Geographic Analysis of Population (GEO 5435C) 3 credits
Prerequisite: GEO 4022 or equivalent
Examination of theory and method in the geographical analysis of population. Focus on population distribution, its composition and causes, consequences, and projection of change. Mathematical and statistical models.

Research in the Geosciences (GEO 6118) 3 credits
Prerequisite: Admission to graduate program in geosciences
An introduction to and overview of research in the geosciences with an emphasis on department research interests. This seminar is recommended strongly for all beginning geoscience graduate students.

Plants and People (GEO 6317) 3 credits
Prerequisite: Permission of instructor
Course explores interaction between humans and plants - how people use plants in terms of traditional rural resource use and modern urban use. Topics covered include medicine, food, gardens, agriculture, religion, construction, ornamentation and fuel.

Culture, Conservation, and Land Use (GEO 6337) 3 credits
Course considers relationship between humans and environment with emphasis on current cultural practices and ideologies concerning preservation and consumption from both local and global perspectives. A portion of the course is designed to permit students to reflect on the personal roles all of us play in relation to the ecosystems in which we live.

Seminar in Urban Area Analysis (GEO 6608) 3 credits
An analysis of the distribution, structure, patterns of land use and transportation, economic base, inter- and intra-relationships, and other spatial aspects of urban phenomena. Emphasis upon modern data acquisition techniques, quantitative analysis and measurement, and graphical methods of analysis and presentation. Content will vary; may be repeated.

Directed Independent Study (GEO 6908) 1-3 credits
Individually formulated research project pursued under the direction of a staff member competent in the particular phase of geographic study. Physical parameters, theories and applications of photography, radar, thermal infrared and other data-gathering systems will be investigated. Conversion of data for cartographic or computer graphics display will be studied. Content will vary (no more than 3 credits may be applied to the minimum degree requirements).

Graduate Research (GEO 6918) 1-12 credits
Prerequisite: Permission of instructor
Supervised research in the geosciences.  Grading: S/U

Geosciences Colloquium Series (GEO 6920) 1 credit
This course is designed to help incoming graduate students develop an awareness of and an appreciation for the multiple research perspectives/approaches that can be brought to studies in geosciences. It is organized around presentations in the department's colloquium series, which showcases geoscience-related research by faculty and graduate students in and outside the department.  Grading: S/U

Seminar in Special Topics in Regional or Systematic Geography (GEO 6938) 3 credits
A study of selected topics that are central to the advanced study of geography: construction, analysis, and synthesis of regional systems. It includes techniques, methodology, and procedures for defining and solving problems of a geographic nature and involves case study illustrations. Specific content will vary.

Master's Thesis (GEO 6971) 1-6 credits
Original investigation leading to scholarly analysis of a significant geographic topic in the area of specialization which will be supervised by a major professor and a graduate committee.  Grading: S/U

Advanced Research (GEO 7978) 1-9 credits
Prerequisite: Doctoral students only
Dissertation related research prior to taking the candidacy exam. May be repeated in subsequent semesters.

Dissertation (GEO 7980) 1-9 credits
Prerequisite: Doctoral students only
Dissertation related research taken after passing the candidacy exam.

Digital Image Analysis (GIS 5033C) 3 credits
Prerequisite: GIS 4035C or GIS 5038C
Course is the second in a three-course sequence that follows the national model for core curriculum in remote sensing. Digital techniques for processing and analyzing remotely sensed imagery include image enhancement, image classification, ground truthing, and accuracy assessment.

Remote Sensing of the Environment (GIS 5038C) 3 credits
Prerequisite: GIS 3015C
The first of a three-course sequence, this one covers principles and concepts of remote sensing, aerial photograph and satellite image interpretation and analysis. Includes a survey of remote sensing data sources, hands on lab projects in a GIS environment and an introductory research project.

Principles of Geographic Information Systems (GIS 5051C) 3 credits
Prerequisite: GIS 3015C or equivalent
Basic concepts of geographic information systems. Evaluation of hardware and software components. Examination of data structures and fundamental GIS functions. Application potential and laboratory experience with GIS systems. Basic GIS project design and implementation.

Applications in Geographic Information Systems (GIS 5100C) 3 credits
Prerequisite: GIS 4043C or GIS 5051C or equivalent
Advanced techniques for raster modeling, network systems, and statistical analysis in geographic information systems. System planning and implementation issues in applying GIS in diverse areas. GIS-based spatial modeling issues.

Programming in Geographic Information Systems (GIS 5103C) 3 credits
Prerequisites: GIS 4043C or 5051C
Course covers basic computer programming concepts and methodologies. Issues for customizing and/or extending available functions in selected cutting edge GIS are discussed along with advanced geoprocessing modeling and data analysis with scripts. Project design and development are addressed.

Photogrammetry and Aerial Photography Interpretation (GIS 6028C) 3 credits
This course introduces concepts, theories and applications of photogrammetry. It covers history, principle, geometry, stereoscopy of aerial photography and fundamentals of analytical photogrammetry.

LiDAR Remote Sensing and Applications (GIS 6032C) 3 credits
Prerequisites: GIS 5051C; Geosciences graduate students only
Introduces LiDAR principles, sensors and platforms, data processing and analysis and applications. Students master basic skills of LiDAR needed to leverage the commercial LiDAR sources and information products in a broad range of applications.

Web GIS (GIS 6061C) 3 credits
Prerequisite: GIS 4043C or GIS 5051C
This course provides students with a comprehensive and up-to-date overview of Web GIS, including the basic concepts, principles, related fields and frontiers. It also provides state-of-the-art technical skills to build Web GIS applications and the knowledge needed to choose from various Web GIS development options.

Geospatial Databases (GIS 6112C) 3 credits
Prerequisite: GIS 4043C or GIS 5051C or equivalent
Geospatial databases provide the functions of storing, managing and querying geospatial data and are an essential component of geographical information systems (GIS). This course covers the fundamental principles, techniques and methodologies for designing and implementing a geospatial database and querying and geoprocessing in geospatial databases. Students receive hands-on experience via labs and projects.

Topics in Geoinformation Science (GIS 6120) 3 credits
Prerequisites: GEO 4022 and GIS 4043C or equivalent
Technical, operational, and management issues in geographic information systems. Examination of GIS function algorithms, data structures, error analysis, and other topics in GIS applications.

Hyperspectral Remote Sensing (GIS 6127) 3 credits
Prerequisites: GIS 4035C and 4037C or GIS 5033C and 5038C
Course introduces state-of-the-art techniques for the processing and interpretation of hyper- and ultraspectral data with a focus on thematic information extraction from airborne and satellite-based hyperspectral sensors. Course covers the full hyperspectral remote sensing processing chain from data acquisition and calibration to image processing and thematic mapping.

Spatial Data Analysis (GIS 6306) 3 credits
Prerequisite: GIS 5051C
Introduces a range of spatial statistical methods commonly used in the analysis of geo-spatial data in GISciences. Emphasis on gaining insight into the overall framework for analysis and developing an understanding of various concepts with in-depth treatment of select techniques. Methods are mainly discussed within the context of GIS technology.

Geology

Undergraduate Courses /link to graduate courses

The Blue Planet (ESC 2000) 3 credits
Using the scientific method, critical thinking skills, and data analysis, this course will examine the fundamental processes of the Earth system, composed of an atmosphere, hydrosphere, lithosphere, biosphere and exosphere, through time. The course will also explore interactions between these spheres, including critical analysis of scientific theories and emphasizes Earth’s connections with humans. This is a General Education course. 

Physical Geology/Evolution of the Earth (GLY 2010C) 4 credits
Using the scientific method, critical thinking skills and data analysis, this course will examine the fundamental processes of the Earth system, composed of an atmosphere, hydrosphere, cryosphere, lithosphere, biosphere and exosphere, through time. The course will also explore interactions between these spheres, including critical analysis of scientific theories and emphasizes lithospheric connections with humanity. This is a General Education course. 

The History of the Earth and Life (GLY 2100) 3 credits
An introduction to historical geology. The study of ancient continents and life forms, with special emphasis on the geologic history of the North American continent. This is a General Education course.

Geology Study Abroad (GLY 2952)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study programs.

Geology of Florida (GLY 4155C) 4 credits
Prerequisite: GLY 2010C or equivalent
General review of the geological evolution of Florida from the Paleozoic to the recent. Emphasis is given to the local geomorphology and stratigraphy, and to evolution, extinction, and systematics of the major fossils. Also discussed are theories on the origin of the Everglades, fossil and living coral reef tracts, and the regional hydrogeology. Lecture, laboratory and field studies. 

Paleontology (GLY 3603C) 3 credits
Prerequisites: GLY 2100 and an introductory biology course
An introduction to the study of fossil plants and animals. Emphasis will be placed on the taxonomy and classification of major plant and animal phyla represented as fossils, and on the evolution of life as shown by the fossil record. Lecture, laboratory and field studies.

Coastal and Marine Science (GLY 3730) 3 credits
Introduction to the study of coastal and marine environments, particularly as they are related to human use and management of biophysical resources. Focuses on materials and dynamic processes of ocean basins, sediments, and seawater; including ocean-climate linkage, greenhouse effect, and sea-level change.

Cooperative Education - Geology (GLY 3949) 1-3 credits
Grading: S/U

Environmental Geochemistry (GLY 4241) 3 credits
Prerequisite: One semester of college chemistry
Examination of current geochemical problems affecting the earth at global, regional, and local scales. Discussion of the natural geochemical background of substances including a review of geochemical principles.

Mineralogy and Petrology (GLY 4310C) 4 credits
Prerequisite: CHM 2045, CHM 2054L, GLY 2010C and PHY 2048 
Identification and classification of rocks and minerals in hand samples and thin sections using their physical and chemical properties. Discussion of elementary crystallography, symmetry and chemical bonding in controlling physical and chemical mineral properties. Association of igneous and metamorphic rocks to structures, landforms and tectonic settings. Use of mineral suites and textures to constrain rock crystallization and deformation history. Discussion of chemical equilibrium and the phase rule, and x-ray mineralogy techniques. Lecture and laboratory. 

Ancient Carbonate Platforms (GLY 4351C) 3 credits
Prerequisite: Permission of instructor
This course introduces students to the geology of the carbonate platforms including types of platforms, types of sediment, platform sediment zonation and interpretation of carbonate sedimentary record. Includes nine- to eleven-day field trip to western Texas and southern New Mexico. 

Structural Geology (GLY 4400C) 4 credits
Prerequisite: GLY 2010C
Structural features of the earth's crust and the deformational forces responsible. Structural aspects of rock mechanics. Applications to mineral exploration and mining, hydrogeology, and engineering geology. Lecture and laboratory.

Solid Earth Geophysics (GLY 4451) 3 credits
Course gives an introduction to the fundamental principles of each major branch of geophysics: seismology, gravitation, magnetism, and electrical and thermal properties. Emphasis is given to geodynamics and plate tectonics. 

Stratigraphy and Sedimentation (GLY 4500C) 4 credits
Prerequisites: GLY 2010C and GLY 2100
An introduction to sediments, sedimentary processes, and the stratigraphic record. Focus will be on methods of stratigraphic analysis, transport and deposition of sedimentary environments, and types and compositions of sedimentary rocks. Lecture and laboratory.

Geomorphology (GLY 4700C) 3 credits
An introductory study of landscapes, how they formed in response to earth-building and erosional processes and their relationship to underlying geology. Applications of landform analysis to geological mapping, mineral and petroleum exploration, geological and ocean engineering. Global landscapes. Slide illustrated lectures and laboratory.

Geology Field Methods (GLY 4750C) 3 credits
Prerequisite:  Permission of instructor
Geologic survey techniques, identification and description of rocks, structures and fossils, and report writing. Includes an out-of-state field trip (in southeast U.S.) plus several weekend trips to southern Florida localities. A fee is charged for field trips.

Field Camp (GLY 4790) 6 credits
Prerequisite: Approval by department's undergraduate committee
Exercises in field mapping, air photo interpretation, stratigraphic analysis, structural and hydrologic problems. The camp is held in the Durango, Colorado, area during mid-May to mid-June (summer term A). In addition to the University's standard credit registration fees, a separate camp fee is charged. For 2001 the fee was $1300. Food and other personal expenses are additional.

Hydrogeology (GLY 4822) 3 credits
Prerequisites: GLY 2010C, MAC 2311, and CHM 2045 or permission of instructor
Strong environmental emphasis. Analytical study of the principles and applications of ground and surface water flow. Quantitative prediction of leachate attenuation. Flow net theory. Well hydraulics. Water quality, management and legislation.

Groundwater Numerical Modeling (GLY 4832C) 3 credits
Prerequisite: GLY 4822 or equivalent
This course introduces students to the theory and practice of groundwater modeling, with emphasis on model conceptualization, construction, simulation and calibration using Groundwater Modeling System (GMS), an advanced and popular 3D simulation software for groundwater flow and transport modeling. The class comprises three parts: a rapid overview/review of groundwater mechanics, an introduction to finite-difference methods and application of GMS. 

Directed Independent Study (GLY 4905) 1-3 credits
Prerequisite: Requires prior arrangement with faculty member
Grading: S/U

Directed Independent Research in Geosciences (GLY 4915) 1-6 credits
Students work closely with research mentors to conduct research and inquiry in Geosciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Geosciences (GLY 4916) 0-6 credits
Students work closely with research mentors to conduct research and inquiry in Geosciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Special Topics (GLY 4930C) 1-3 credits
Specially arranged programs in geology.

Field Experience (GLY 4948C) 1 credit
Prerequisites: Junior or senior standing; permission of instructor
Direct observation, description, and analysis of selected field sites and associated topics.  Grading: S/U

Geology Study Abroad (GLY 4957)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study programs.

Geology Graduate Courses

Paleoenvironments and People (EVR 6417) 3 credits
This course examines paleoclimate events and past human-environment interaction primarily during the Holocene. Through exploring how people have modified their environment and responded to notable climate stress events such as the Younger Dryas, Terminal Classic Drought and Little Ice Age, students gain experience and skills to consider how future climate scenarios may affect modern societies.

Environmental Geochemistry (GLY 5243) 3 credits
Prerequisite: One year of college chemistry
Examination of current geochemical problems affecting the earth at global, regional, and local scales. Discussion of the natural geochemical background of substances including a review of geochemical principles.

Shore Erosion and Protection (GLY 5575C) 3 credits
Study of geomorphology and use of coasts, sediment budgets and dune-beach interaction, effects of engineering structures, coastal hydraulics, tides and currents, waves and structures, coastal water level fluctuations, shore erosion control, beach replenishment, coastal protection and restoration, fate of replenished beaches.

Marine Geology (GLY 5736C) 3 credits
Theoretical and applied earth science in the marine environment. Introduction to the history of marine geology, structure and evolution of continental margins and the worlds basins in terms of modern plate tectonic theory, ocean sediments and sedimentary regimes, geologic effects of waves and currents, dynamics of coastal environmental processes, fluctuations of mean sea level through time, ocean mineral resources.

Advanced Topics in Applied, Coastal, and Hydrogeology (GLY 5934) 3 credits
Occasional advanced courses in specialized areas of engineering, coastal and hydrogeology not fully covered in other program courses.

Advanced Environmental Geochemistry (GLY 6246) 3 credits
A study of the principles of geochemistry as they are applied to environmental problems relating to water. Hydrogeology includes study of contamination of surface and underground terrestrial water and coastal waters. The course will familiarize students with the methods, capabilities, and jargon of geochemistry as it applies to their areas of interest.

Comparative Carbonate Sedimentology (GLY 6352) 3 credits
Prerequisites: Permission of instructor 
Dedicated to the study of carbonate deposits in the process of formation, methods of studies, examination of sediment types and factors that control their distribution and tracking depositional environments, rocks and calcareous organisms into the recent geologic past (Pleistocene and Holocene). 

Environmental Geophysics (GLY  6457 ) 3 credits
Prerequisite: Graduate standing in geology or related discipline or permission of instructor
An introduction to near-surface geophysical methods for mapping the ground at shallow depths. Emphasis on electromagnetic and electrical methods such as ground penetrating radar (GPR) and resistivity imaging specifically for environmental applications. A field-based case study using an integrated array of real geophysical data sets collected in a local site will be conducted to give students a practical approach to applied geophysical methods.

Coastal Environments (GLY 6737) 3 credits
Dynamics of depositional systems in coastal environments. Emphasis on variability of sediments, geomorphology and littoral processes associated with coastal dunes, lagoons, estuaries, beaches and nearshore environments.

Global Environmental Change (GLY 6746) 3 credits
An introduction to the study of global climate change through time. Included and in-depth studies of the causes of and evidence for past environmental changes, major perturbations of global natural environmental systems, the effects of sea level changes, solar variations, and planetary dynamics on climate, and details of Quaternary paleoclimate models.

Groundwater Solute Transport Modeling (GLY 6828) 3 credits
Prerequisite: GLY 6836 or equivalent
Studies the mechanisms that govern the movement of water and pollutants in aquifers. Develops a complete conceptual model and overviews a sound mathematical model of flow and pollution in saturated aquifers, including the relevant processes and internal relations, and identifies their parameters. Introduction of numerical methods. Uses documented analytical and numerical models for the solution of groundwater flow with solute. Extensive hands-on experience on PC and Workstation.

Modeling Groundwater Movement (GLY 6836) 3 credits
Prerequisite: GLY 4832C or equivalent
Focuses on hydrogeologic modeling, considers groundwater flow space and time scale, and surface-ground waters interaction. Evaluates methods of analysis for the rainfall-runoff process, evapotranspiration and soil moisture, deep percolation, river-aquifer interaction and flow routing, and catchment basin modeling. Construction of the conceptual groundwater model, defining the mathematical solution, and application of the numerical method of solution. Surveys numerical methods. Overviews the parameter identification. Uses documented numerical models and computer codes for the solution of groundwater problems. Extensive hands-on experience on PC and Workstation.

Methods in Hydrogeology (GLY 6838) 3 credits
Prerequisite: GLY 4822 or equivalent with a grade of "C" or better, or permission of instructor
Designed to introduce students to practical aspects of hydrogeology, including project design, field methods and data analysis.

Coastal Hazards (GLY 6888) 3 credits
A global review of natural and human-induced hazards as they affect coastal zones, including the identification of site specific and regional coastal hazards. Mitigation and management are related to individual and community hazard perceptions, risk assessment and response. Emphasis is placed on the susceptibility of the SE Florida region to oil (chemical) spills, coastal floods due to extreme events, and to the potential impacts of global sea level rise.

Benchmark Developments in Hydrogeology (GLY 6897) 3 credits
Prerequisite: GLY 4822 or permission of instructor
This seminar examines changes in humans' understanding of groundwater through time beginning with ancient uses of groundwater, continuing through the present and ending with projections about the future of hydrogeologic research. Students will solidify their knowledge of the fundamental principles of hydrogeology and will broaden their understanding of the history and philosophy of science.

Directed Independent Study (GLY 6908) 1-3 credits
Faculty supervised directed independent study.  Grading: S/U

Thesis Seminar (GLY 6931) 3 credits
Methods, procedures and policies for preparing, presenting, defending, and completion of a thesis or dissertation. Focus on the framework and scientific style for scholarly reports and composition. Consideration of title; abstract; introduction; data selection, correlation and arrangement; methods and experiment; results; discussion; summaries; and conclusions. Practica provide weekly experience to steps in thesis preparation.

Special Topics in Applied Geology (GLY 6934) 1-4 credits
Occasional special topics and courses in specialized areas of coastal geology, hydrogeology, engineering geology and environmental geology.

Master's Thesis (GLY 6971) 1-6 credits
Grading: S/U

Physical and Geological Oceanography (OCE 6097) 3 credits
Prerequisite: Permission of instructor
Provides an overview of the atmospheric, physical and geological processes that govern our oceans and coastal margins.

Interdisciplinary Studies

Undergraduate Courses

Introduction to Animal Science (ANS 3006C) 4 credits
Prerequisites: BSC 1010, 1010L, 1011, 1011L and CHM 2045, 2045L, 2046, 2046L
Overview of nutrition, physiology, genetics, growth and development related to the equine, beef, swine, dairy, aquatic and poultry industries. Overview of the farm animal, poultry and aquatic industries. Lab consists of relevant field experiences in these industries.

Introduction to Undergraduate Research 1: Lower Division (IDS 1911) 1 credit
Prerequisite: Permission of instructor
This course introduces first-year students to academic research and prepares them for engagement in undergraduate research.

Introduction to Undergraduate Research 2: Lower Division (IDS 1913) 1 credit
Prerequisites: IDS 1911 with minimum grade of "C," permission of instructor
This course introduces first-year students to the process of discovery as it relates to formulating research questions, preparing a research poster and developing research communication skills.

Health Science 1: Foundation (IDS 2122) 3 credits
An introductory course into interprofessional education and collaborative practice (IPECP) within the world of healthcare through specific competencies. Students will be exposed to team-based learning through understanding roles, responsibilities, ethics, communication and teamwork.

Human Mission to Mars (IDS 2382) 3 credits
This course is designed to explore the challenges and opportunities offered by the planned human missions to Mars, covering topics such as human space travel to the red planet, the impact of spaceflight on the human body, the effects of long-term spaceflight on human consciousness, human relationships and groups of humans, the key components of building and functioning a Martian habitation module, growing food on Mars and the ethical and political issues related to a human mission to Mars. To address problems and challenges associated with these topics, students explore the process of scientific inquiry and creativity applying the scientific method to propose solutions to problems in these various areas. All the while, they also embrace the uncertainty associated with the critical evaluation of these problems and challenges. This is a General Education course.

Undergraduate Research Experience (IDS 2912) 0 credits
Prerequisite: Permission of instructor
This course is designed to provide skill building for undergraduate research. Students define research topics, formulate research questions, conduct a literature review, prepare research proposals and develop research communication skills. Students may enroll in this course up to two times.  Grading: S/U

Health Science 2: Evaluating the Evidence (IDS 3184) 1 credit
Prerequisite: IDS 2122
Corequisite: IDS 3893
In this course students are introduced to evidence-based health care and the process of identifying and evaluating the evidence.

Health Science 3: Capstone (IDS 3893) 1 credit
Prerequisite: IDS 2122
Corequisite: IDS 3184
In this course students evaluate and disseminate evidence related to a health issue.

Premed Success (IHS 3124) 2 credits
Prerequisites: 8 credits of general biology and chemistry
Designed to help pre-health professional students (medical, dental, pharmacy, veterinary, etc.) negotiate the complex and often confusing world of medical school applications, admission tests, admission essays, interviews, financing medical school and much more. The scope of this course can be expanded to fit student needs and interests.

Basic Clinical Skills for Pre-Health Students (IDS 3125) 2 credits
Prerequisite: Minimum overall GPA of 3.0
Provides students with basic clinical skills that will ensure more meaningful medical experiences (through shadowing or volunteering) prior to entering a health-related graduate program. Students are introduced to medical professionalism and gain basic medical knowledge through training on blood borne pathogens, vital signs, CPR, HIPAA, EKGs and taking patient histories.

Fundamentals of Research and Inquiry (IDS 3910) 1 credit
Prerequisite: Permission of instructor
Introduction to scientific research. Students learn and apply the scientific method to their own research questions. The course focuses on scientific literacy such as reading scientific papers, interpreting and analyzing data and communicating scientific results. The course promotes and facilitates the matching of students to research mentors, but cannot guarantee the matching.

Introduction to Undergraduate Research Design (IDS 3911) 1 credit
Prerequisite: Permission of instructor
Introduction to research exposure and skill building focused on the scientific process and nature of discovery. Students define research topics, formulate research questions, develop research proposals, prepare experimental plans and develop research communication skills.

Medical Shadowing Internship (IDS 3940) 1 credit
Prerequisites: IDS 3125 and a minimum GPA of 3.0
Designed for students interested in becoming healthcare professionals such as medical doctors, dentists, pharmacists and veterinarians. Students explore the medical field by shadowing selected healthcare professionals in a variety of settings and observing their daily activities, obtaining limited hands-on experience. The scope of this course can be expanded to fit student needs and interests. May be repeated for credit for up to six semesters.

Science Internship (IDS 3941) 1-3 credits
Prerequisite: Permission of instructor
This is an internship course that offers students "real-world" experience in a structured format within specific science disciplines (such as biology, psychology, chemistry, geosciences, physics or mathematics) and which are related to each student's science major.  Grading:  S/U

Artificial Intelligence Applications in Biology (IDS 4139) 3 credits
Prerequisites: BCH 3033 or PCB 3063 or permission of instructor
This course introduces the underlying concepts, techniques and potential of artificial intelligence (AI) in biology. It explores the application of AI and machine learning (ML) methods and algorithms to selected areas in biology. The course also exposes students to contemporary interactive tools to build AI and ML solutions without the need for extensive programming.

Directed Independent Study (IDS 4906) 1-3 credits
Prerequisite: Permission of instructor
Study of topics relating to the special needs and interests of individual students.  Grading: S/U

Special Topics (IDS 4934) 1-3 credits
Special topics of interest to science students.

Current Issues in Biomedicine (ISC 1430) 1 credit
Course is designed for pre-health profession freshmen who participate in the Freshman Learning Communities. This course is an introduction to current/controversial issues in the medical field that helps students understand the innovations on the horizon in medicine. Students will leave the course more knowledgeable about cutting-edge research in biomedicine and the various career paths in this field.

Introduction to Preprofessional Studies (PCB 3083) 3 credits
Prerequisites: 8 credits general chemistry, 8 credits general biology, permission of instructor
Corequisite: PCB 3083L
To familiarize premedical or allied field students with the requirements, demands and rewards of a career in medicine. The course features lectures about a variety of medical disciplines.

Introduction to Preprofessional Studies Lab (PCB 3083L) 1 credit
Prerequisite: Permission of instructor; Corequisite: PCB 3083
Shadowing of physicians in hospital and office settings, including visits to local facilities and observations of actual medical procedures.

mathematics and statistics

Courses offered by the Department of Mathematics and Statistics may require the use of a calculator or computer software. Mathematics majors may not count mathematics courses taken as pass/fail as part of their program.

Prerequisite courses must be completed with grades of "C" or better.

Mathematics Placement Assessment (ALEKS PPL):  All entering freshmen, as well as entering transfer students with no prior college-level course work in mathematics, are required to take an online exam to determine placement in their first mathematics course at FAU. Students may take the exam multiple times, with the highest score used to determine placement. There is a nominal charge for the exam. It is highly recommended that entering transfer students with prior college-level course work in mathematics, but who need additional mathematics courses, also take the exam (though it is not a requirement). For more information, visit here.

Undergraduate Courses /link to graduate courses

*Prerequisite courses must be completed with grades of "C" or better.

* RI: Introduction to Data Science (CAP 3786) 3 credits
Prerequisite: COP 2220C or MAD 2502
This research-intensive (RI) course surveys the foundational topics in data science: Data acquisition, data exploration and visualization, data analysis with statistics and machine learning, data at scale via working with big data. The course uses statistical software to work through real-world examples that illustrate these concepts. Concurrently, students learn statistical and mathematical foundations that power the data scientific approach to problem solving. (Course change effective summer 2025.)

* Cryptography and Information Security (CIS 4362) 3 credits
Prerequisites: MAS 2103 and MAD 2502
Classical cryptology, entropy. Stream and block ciphers. Public-key versus symmetric cryptography, one-way and trap-door functions. Primality and factorization, DLP, Diffie-Hellman, RSA and ElGamal cryptosystems. Issues of computer and network security. Secure protocols, identification, authentication, digital signatures, secret sharing schemes.

* Modern Analysis (MAA 4200) 3 credits
Prerequisites: MAC 2313, MAD 2104  and MHF 3202
Basic properties of real numbers. Functions. Limits and properties of continuous functions. Differential calculus.

* Introductory Analysis 1 (MAA 4226) 3 credits
Prerequisite: MAS 3156
Course covers real and complex numbers, metric spaces, sequences and series, continuity, differentiation and integration of functions of one or more real variables.

* Introductory Analysis 2 (MAA 4227) 3 credits
Prerequisite: MAA 4226
Continuation of Introductory Analysis 1. Course covers real and complex numbers, metric spaces, sequences and series, continuity, differentiation and integration of functions of one or more real variables.

* Introductory Complex Analysis (MAA 4402) 3 credits
Prerequisite: MAC 2313
An introduction to complex analysis, analytic functions, Taylor series, Cauchy's theorem. Calculus of residues. Recommended for engineering and science majors.

* College Algebra (MAC 1105) 3 credits
Gordon Rule, computational
Prerequisite: MAT 1033 or MGF 1130 or MGF 1131 or suitable placement score
Through this course, student will develop problem solving skills, critical thinking, computational proficiency, and contextual fluency through the study of equations, functions, and their graphs. Emphasis will be placed on quadratic, exponential, and logarithmic functions. Topics will include solving equations and inequalities, definition and properties of a function, domain and range, transformations of graphs, operations on functions, composite and inverse functions, basic polynomial and rational functions, exponential and logarithmic functions, and applications. This is a General Education course. 

* Trigonometry (MAC 1114) 3 credits
Gordon Rule, computational
Prerequisite: MAC 1105
Theory of trigonometric functions and their inverses, graphs, identities and conditional equations, solutions of triangles, complex numbers and polar representation. Additional topics as time permits. This is a General Education course.

* Precalculus Algebra (MAC 1140) 3 credits
Gordon Rule, computational
Prerequisite: MAC 1105
Recommended Corequisite: MAC 1114
Polynomial, rational, and other algebraic functions; exponential and logarithmic functions; piecewise-defined functions. Properties and graphs of functions. Polynomial and rational inequalities. Conic sections. Matrices and determinants. Sequences and series. Mathematical induction. Binomial theorem. Applications. This is a General Education course.

* Precalculus Algebra and Trigonometry (MAC 1147) 4 or 5 credits
Gordon Rule, computational
Prerequisite: MAC 1105
Polynomial, rational, and other algebraic functions; trigonometric, inverse trigonometric, exponential and logarithmic functions; piecewise-defined functions. Properties and graphs of functions. Polynomial and rational inequalities. Trigonometric identities. Conditional trigonometric equations. Conic sections. Solutions of triangles. Vector algebra. Parametric equations. Polar coordinates. Matrices and determinants. Sequences and series. Mathematical induction. Binomial theorem. Applications. This is a General Education course.

*Prerequisite courses must be completed with grades of "C" or better.

* Introduction to Calculus with Applications (MAC 2210) 4 credits
Prerequisite: MAC 1105
This course provides an overview of the salient math topics most heavily used in the core sophomore-level STEM courses. These include algebraic manipulation, trigonometry, vectors and complex numbers, sinusoids and harmonic signals, systems of equations and matrices, differentiation, integration and differential equations. All math topics are presented within the context of applications. This is a General Education course.

* Methods of Calculus (MAC 2233) 3 credits
Gordon Rule, computational
Prerequisite: MAC 1105
A descriptive and intuitive introduction to the methods and applications of differentiation and integration. Primarily for social science and business administration majors. This is a General Education course.

* Life Science Calculus 1 (MAC 2241) 4 credits
Gordon Rule, computational
Prerequisite: MAC 1105
This course is an introduction to the methods and applications of differential and integral calculus for students in the life sciences. Topics include limits, continuity, derivatives of basic functions in mathematics, differentiation rules, optimization problems, the definite integral and area under a curve, basic theory of differential equations and modeling with differential equations in life sciences. The is a General Education course and counts toward the Gordon Rule computational requirement. Students cannot receive credit for both this course and Methods of Calculus (MAC 2233).

* Calculus with Analytic Geometry 1 (MAC 2311) 4 credits
Gordon Rule, computational
Prerequisites: MAC 1147, or MAC 2210, or both MAC 1140 and MAC 1114
In this course, students will develop problem solving skills, critical thinking, computational proficiency, and contextual fluency through the study of limits, derivatives, and definite and indefinite integrals of functions of one variable, including algebraic, exponential, logarithmic, and trigonometric functions, and applications. Topics will include limits, continuity, differentiation and rates of change, optimization, curve sketching, and introduction to integration and area. This is a General Education course. 

* Calculus with Analytic Geometry 2 (MAC 2312) 4 credits
Gordon Rule, computational
Prerequisite: MAC 2311
Continuation of MAC 2311. Logarithmic, Exponential, hyperbolic, and inverse trigonometric functions, techniques of integration, partial fractions, area, trapezoid and Simpson's rules, volume, work; analytic geometry; Taylor approximations; sequences and series; polar representation of complex numbers. This is a General Education course.

* Calculus with Analytic Geometry 3 (MAC 2313) 4 credits
Prerequisite: MAC 2312
Vector space, inner product, length, cross product, curves in space; functions of several variables: differentiability, gradient, tangent planes, differential approximation, surfaces, optimization with constraints, multiple integrals, theorems of Green, Stokes and Gauss.

* Discrete Mathematics (MAD 2104) 3 credits
Gordon Rule, computational
Prerequisite: MAC 1105 or higher
A proof-oriented approach to and applications of propositional logic, sets, functions, relations, combinatorics, graphs and trees.

* Introduction to Computational  Mathematics (MAD 2502) 3 credits
Prerequisite: MAC 2311 or MAP 2492
Corequisite: MAP 2492 
An introduction to mathematical computation by means of algorithmically solving a number of mathematical problems. Introduction to C++. The emphasis will be on the mathematical algorithms involved with problems from analysis, number theory, combinatorics, algebra, linear algebra, numerical analysis and probability.

Discrete Mathematical Structures (MAD 3106) 3 credits
Prerequisites: MAC 2311 or MAD 2104 or MAS 2103 with minimum grades of "C"
Introduction of various mathematical structures and theorems to prepare students for further study in mathematics and applied mathematics. Topics are chosen from graph theory, network flows, matchings and algorithmic proofs, min-max theorems, lattices, Hasse diagrams, finite geometries and designs, eventually periodic functions, and periodic structures. 

*Prerequisite courses must be completed with grades of "C" or better.

* Numerical Methods (MAD 3400) 3 credits
Prerequisites: MAC 2312, and some programming experience (not available for students with credit for MAD 4401)
An introductory course in scientific computation for engineering and science students. Topics covered include numerical errors, roots of equations, curve fitting, matrix methods, numerical integration, solution of differential equations and graphic output.

* Graph Theory (MAD 4301) 3 credits
Prerequisites: MAD 2104 and MAS 2103
A first course in theory and applications of graphs including basic properties; coloration; algebraic and geometric aspects; enumeration; algorithms; network flows.

* Numerical Analysis 1 (MAD 4401) 3 credits
Prerequisites: MAC 2313, MAP 2302, MAS 2103 and some programming experience
Floating point arithmetic, interpolations, approximations, differentiation and integration, linear and non-linear systems of equations, differential equations, eigenvalues and eigenvectors, error analysis and norms. This course emphasizes theory. (Not available for students with credit for MAD 3400.)

Post-Quantum Cryptography (MAD 4475) 3 credits
Prerequisites: MAS 2103 and COP 2220C with minimum grades of "C"
This course provides an introduction to quantum-resistant cryptographic schemes: their underlying mathematical problems, formalisms, and constructions, with a focus on the computational aspects. Topics include code-based cryptography, lattice-based cryptography, isogeny-based cryptography, and multivariate-based cryptography. 
(Course change effective summer 2025.)

Cryptography of Blockchain (MAD 4476) 3 credits
Prerequisites: MAD 2104 and COP 2220C with minimum grades of "C"
This course provides mathematical foundations of blockchain. Topics include history of blockchain, consensus mechanisms, Hash function, digital signature schemes, zero-knowledge proofs and SNARKs, verifiable random functions and quantum-safe blockchain.
(Course change effective summer 2025.)

* Introduction to Coding Theory (MAD 4605) 3 credits
Prerequisites: MAS 2103 and STA 4442 or equivalent
Introduction to the theory of Error Correcting Codes. Binary symmetric channel, probability of error, finite fields, linear codes, standard array, maximum likelihood decoding, sphere packing, Plotkin and other bounds, Hamming codes, Perfect codes, BCH codes, Dual codes, the Krawtchouk polynomials, and MacWilliams' theorem.

Topics in Mathematics for Teachers (MAE 1935) 1-3 credits

Topics in Mathematics for Teachers (MAE 3935) 1-3 credits

* Mathematics of Data Science (MAP 2192) 3 credits
Prerequisites: MAC 1105 or MGF 1130 and programming competency at the level of an online short course
This course surveys mathematical foundations in data science. Topics may include modeling with functions, matrices, solving linear systems, differentiation, integration, multivariate thinking and geometry, regression models, optimization, sensitivity analysis and graph theory. 

* Differential Equations 1 (MAP 2302) 3 credits
Gordon Rule, computational
Prerequisite: MAC 2312
An introduction to ordinary differential equations stressing basic techniques and applications.

Mathematics for Biological Sciences 1 (MAP 2491) 3 credits
Gordon Rule, computational
Prerequisite: MAC 1105 with minimum grade of "C" 
This course is an introduction to the fundamental mathematical methods in differential and integral calculus, and introductory concepts in differential equations and dynamical systems with an emphasis on modeling dynamic processes in the biological sciences. Topics include limits, continuity, derivatives of basic functions in mathematics, differentiation rules, vector fields and changes in states, the Riemann integral and area under a curve, Euler’s method for computing solutions to differential equations and optimization problems. Theory is complemented with basic programming to aid visualization, modeling and simulation. This is a General Education course and counts toward the Gordon Rule computational requirement. Students cannot receive credit for both this course and Methods of Calculus (MAC 2233). 

Mathematics for Biological Sciences 2 (MAP 2492) 3 credits
Prerequisite: MAP 2491 or MAC 2233 or MAC 2241 or Mac 2311 with minimum grade of "C"
This is the second semester of the Mathematics for Biological Sciences sequence. It develops the foundational mathematical machinery necessary to study behaviors and properties of continuous and discrete dynamical systems of more than one variable including results from multivariate calculus, differential equations and linear algebra. Mathematical concepts are grounded in real examples, from and applications to, biology, physiology, neuroscience, ecology, evolution, psychology and/or the social sciences. Theory is complemented with basic programming to aid visualization, modeling and simulation. 

*Prerequisite courses must be completed with grades of "C" or better.

* Engineering Mathematics 1 (MAP 3305) 3 credits
Prerequisite: MAC 2312
Complex numbers, first order differential equations, second order linear differential equations, solution of equations by Laplace transforms, solution of linear systems of differential equations.

* Applied Mathematical Modeling (MAP 4103) 3 credits
Prerequisites: MAP 2492 or ([MAP 2302 or MAP 3305] and [MAS 2103 or MAC 2313])
This course covers the use of differential and difference equations in scientific modeling. Emphasis is on the "modeling" cycle with undergraduate research and inquiry (URI) components. 

Introduction to Methods in Complex Systems (MAP 4112) 3 credits
Prerequisites: MAC 2313 and (MAS 2103 or MAP 3305)
Introduction to mathematical tools for analyzing and developing complex systems, including neural networks, reinforcement learning and deep learning systems. Basic principles, methods and applications of deep artificial neural networks to scientific data with an emphasis on image data.

* Actuarial Mathematics 1 (MAP 4172) 3 credits
Prerequisites: MAC 2311, MAC 2312, MAC 2313, and STA 4442
The course covers concepts from calculus and probability as they pertain to actuarial sciences. It covers differential equations, parameterized curves, general probability, Bayes' theorem, and univariate and multivariate probability distributions.

* Actuarial Mathematics 2 (MAP 4173) 3 credits
Prerequisites: ECO 2023 and RMI 3011
Interest theory (discrete and continuous), mathematics underlying economics and finance.

* Mathematics of Cybersecurity (MAP 4190) 3 credits
Prerequisites: MAD 2104 and MAS 2103
This course introduces students to common mathematical concepts and tools relevant to cybersecurity. It includes fundamentals on metrics, probability models, data analysis, graph theory and game theory. By studying examples, students learn how to use mathematics to analyze and solve problems in cybersecurity.

* Differential Equations 2 (MAP 4303) 3 credits
Prerequisite: MAP 2302
Further techniques in ordinary differential equations and an introduction to partial differential equations.

*Prerequisite courses must be completed with grades of "C" or better.

* RI: Industrial Problems in Applied Math (MAP 4913) 3 credits
Prerequisites: MAP 2492 or ([MAP 2302 or MAP 3305] and [MAS 2103 or MAC 2313])
This research-intensive course pits students in small groups against real-world problems provided by industrial partners. 

Internship in Actuarial Sciences (MAP 4945) 1-6 credits
Prerequisite: Permission of department
Supervised internships individually assigned to accommodate students' professional development in the actuarial field. May be repeated for a maximum of 6 credits.

* Matrix Theory (MAS 2103) 3 credits
Prerequisite: MAC 2233 or MAC 2311
Vectors and vector spaces. Linear transformation and matrices. Rank and determinants. Systems of linear equations. Diagonalization. Characteristic values.

Vector Calculus (MAS 3156) 3 credits
Prerequisites: MAC 2313 and MAS 2103, with minimum grades of "C"
Implicit and inverse Function Theorems; Vectors and Vector Fields in Space; Divergence and Curl; Green's, Stokes' and Gauss' Theorems. Introduction to Tensors and Applications.

Introductory Number Theory (MAS 3203) 3 credits
The basic theory of divisibility and congruences. The theorems of Fermat, Euler and Wilson. Quadratic residues.

* Linear Algebra 2 (MAS 4107) 3 credits
Prerequisite: MAS 2103 or Linear Algebra 1
Vector spaces, complex numbers, basis and dimension, eigenvalues and eigenvectors, Cayley-Hamilton theorem, Jordan normal form, and other topics.

* Mathematics for Cryptography (MAS 4206) 3 credits
Prerequisites: MAD 2104 and MAS 2103
This course introduces students to the mathematical foundations of cryptography. It includes probability theory, modular arithmetic, selected topics from number theory, coding theory and lattices. In this course, students learn how mathematics is used in the construction and analysis of cryptographic schemes with some applications in modern cryptography.

* Modern Algebra (MAS 4301) 3 credits
Prerequisites: MAD 2104  and MHF 3202
Elementary number theory. Groups, rings and ideals, polynomials, and fields.

* Introductory Abstract Algebra 1 (MAS 4304) 3 credits
Prerequisite: MAS 4301
Course covers basic structures of abstract and linear algebra, such as groups, rings and ideals, polynomials and factorization, vector spaces and modules, linear transformations, and the classical Galois theory of fields.

* Introductory Abstract Algebra 2 (MAS 4306) 3 credits
Prerequisite: MAS 4304
A continuation of Introductory Abstract Algebra 1. Course covers basic structures of abstract and linear algebra, such as groups, rings and ideals, polynomials and factorization, vector spaces and modules,, linear transformations, and the classical Galois theory of fields.

Intermediate Algebra (MAT 1033) 3 credits
Prerequisite: High school algebra
This course covers topics in intermediate algebra, including properties of and operations on real numbers, scientific notation, linear equations and inequalities, polynomial and rational expressions, exponents and radicals, products and factoring, quadratic equations, and graphing.

University Honors Seminar in Mathematics (MAT 1930) 3 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in mathematics.

*Prerequisite courses must be completed with grades of "C" or better.

Topics in Mathematics (MAT 1931) 1-4 credits
Prerequisite: Permission of instructor
Topics of interest to lower-division students.

Topics in Mathematics (MAT 1932) 1-3 credits
Gordon Rule, computational
Prerequisite: Permission of instructor; Corequisite: MAC 1105
Topics of interest to lower-division students.

University Honors Seminar in Mathematics (MAT 1935) 3 credits
Gordon Rule, computational
A seminar in the University Honors Program on topics in mathematics.

Mathematics Study Abroad (MAT 2952) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Cooperative Education - Mathematics (MAT 3949) 1-2 credits
Grading: S/U

Directed Independent Study (MAT 4906) 1-4 credits
Prerequisite: Permission of instructor
Study of topics relating to the special needs and interests of individual students.

Directed Independent Research in Mathematics (MAT 4915) 1-6 credits
Students work closely with research mentors to conduct research and inquiry in Mathematics. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Mathematics (MAT 4916) 0-6 credits
Students work closely with research mentors to conduct research and inquiry in Mathematics. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Special Topics (MAT 4930) 1-4 credits
Prerequisite: Permission of instructor
Lectures on specialized topics.

* Mathematical Problem Solving (MAT 4937) 3 credits
Prerequisites: MAD 2104, MAS 2103, MAC 2312 and (suggested) MAD 2502
Miscellany of challenging mathematical problems not usually met in the standard courses.

Mathematics Study Abroad (MAT 4957) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Honors Thesis in Mathematics (MAT 4970) 3 credits
Prerequisite:  Permission of department
Supervised research and writing of the honors thesis.

Mathematical Thinking in Context 1 (MGF 1130) 3 credits
Gordon Rule, computational
In this course, students will utilize multiple means of problem solving through student-centered mathematical exploration. The course is designed to teach students to think more effectively and increase their problem-solving ability through practical application and divergent thinking. This course is appropriate for students in a wide range of disciplines/programs. This is a General Education course. 

*Prerequisite courses must be completed with grades of "C" or better.

Mathematical Thinking in Context 2 (MGF 1131) 3 credits
Gordon Rule, computational
Through this course, students will experience the practicality of mathematics in a global society. Students will engage in applications of tools and techniques of mathematics in a variety of contextual situations from everyday life. The course is appropriate for students in a wide range of discipline/programs.  This is a General Education course. 

* Introduction to Advanced Mathematics (MHF 3202) 3 credits
Prerequisite: MAC 2312
This course serves as a transition into advanced mathematics courses. Students learn the formalism for correctly doing and writing proofs in mathematics. Topics include logic and language of proofs, set theory, mathematical induction, relations and orders, functions, and foundations of advanced calculus.

* Mathematical Logic (MHF 3302) 3 credits
Prerequisites: PHI 2102 or MAD 2104 or MAS 2103 or permission of instructor
An introduction to mathematical logic from a contemporary point of view with an eye toward
its applications in philosophy, computer science and linguistics.

* History of Mathematics (MHF 3404) 3 credits
Prerequisite: MAD 2104
Chronological study of the evolution of mathematical thought from primitive counting to modern ideas up to the 21st century.

* Survey of Geometry (MTG 3212) 3 credits
Prerequisite: MAD 2104
Euclidean and non-Euclidean geometries. Introduction to projective geometry and the geometry of transformations.

* Topology for Data Science (MTG 4325) 3 credits
Prerequisites: MAD 2104, MAS 2103 and (COP 2220C or MAD 2502)
Introduction to concepts and methods in applied topology and topological data analysis tools, including persistent homology, and their uses in data science: topological spaces, metric spaces, continuity, simplicial complexes, vector spaces and simplicial homology. Mathematical concepts are grounded by discussions of efficient implementations of computational algorithms and applications. (Course change effective summer 2025.)

Topics in Geometry (MTG 4930) 1-4 credits
Topics in geometry chosen from Euclidean Geometry, Projective Geometry, Geometry of the Complex Plane, Hyperbolic Geometry, Finite Geometries, Automorphism Groups, Riemannian Geometry, Fractal Geometry, Combinatorial Geometry, Computational Geometry, or other areas of current interest.

University Honors Seminar in Statistics (STA 1930) 3 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in statistics.

*Prerequisite courses must be completed with grades of "C" or better.

Topics in Statistics (STA 1932) 1-3 credits
Gordon Rule, computational
Topics of interest to lower-division students.

* Introductory Statistics (STA 2023) 3 credits
Gordon Rule, computational
Prerequisite:  MAT 1033  or MAC 1105 or MGF 1130 or MAC 2233
In this course, students will utilize descriptive and inferential statistical methods in contextual situations, using technology as appropriate. The course is designed to increase problem-solving abilities and data interpretation through practical applications of statistical concepts. This course is appropriate for students in a wide range of disciplines and programs. This is a General Education course. 

Statistics Study Abroad (STA 2952)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

* SAS for Data and Statistical Analyses (STA 3024) 3 credits
Prerequisite: STA 2023 or equivalent
This course introduces the SAS language in a lab-based format. The objective is to develop programming and statistical computing skills to address data management and analysis issues using SAS. The course provides an extensive survey of some of the most common statistical tools and provides decision-making strategies in selecting the appropriate statistical method for the data at hand.

* Computational Statistics (STA 3100) 3 credits
Prerequisites: MAC 2311 and STA 2023 or higher
Computer algorithms for evaluation, simulation and visualization, random number generation, sampling from prescribed distributions. Simulations, graphics for data display, computation of probabilities and percentiles, hypothesis testing, simple linear regression and multiple regression.

Intermediate Statistics Laboratory (STA 3163L) 1 credit
Gordon Rule, computational
Prerequisite: PSY 3234
Computer organization, computer implementation of basic and intermediate statistical inferences that include describing data, graphic presentation, analysis of data. Applications will reflect the descriptive and statistical inferences appropriate to the discipline under which this course is offered (e.g., business, education, engineering, mathematics, psychology, etc.).

* Introduction to Biostatistics (STA 3173) 3 credits
Prerequisite:  MAC 1105
Introduces basic statistical concepts and procedures that are necessary to conduct statistical analysis for biological researchers. The topics covered are probabilistic foundations, experimental designs and their analyses, summarizing and visualizing data, inferential statistics, including hypothesis tests and regression modeling.
*Prerequisite courses must be completed with grades of "C" or better.

Cooperative Education - Statistics (STA 3949) 1-2 credits
Prerequisite: Permission of instructor
Grading: S/U

* Probability and Statistics for Engineers (STA 4032) 3 credits
Prerequisite: MAC 2312
Basic concepts of probability; random variables; discrete and continuous probability distributions; functions of random variables; estimation theory; tests of hypotheses.

* Applied Statistics 1 Lab (STA 4202L) 1 credit
Prerequisite:  STA 4442
Corequisite: STA 4234
This is a first course in regression analysis. Regression analysis explores relationships among variables by modeling a response. The course focuses on data analysis, statistical graphs and diagnostics via personal computing.

* Statistical Designs (STA 4222) 3 credits
Prerequisites: STA 4234, and MAC 2312
Basic concepts of experimental design: randomized blocks, Latin squares, incomplete blocks, factorial designs, fractional factorials, nested designs. Introduction to design of sample surveys: simple random, stratified, cluster sampling; complex designs; ratio and regression estimation; enumerative versus analytical surveys. Student project required.

* Applied Statistics 1 (STA 4234) 2 credits
Prerequisite: STA 4442; Corequisite: STA 4202L
Point and interval estimation, hypothesis tests, non-parametric procedures, contingency tables. Essential distribution theory. Linear models, including multiple regression and analysis of variance. Emphasis on data analysis, statistical graphics, and diagnostics via personal computing.

* RI: Statistical Learning (STA 4241) 3 credits
Prerequisites: STA 4234 or equivalent
This is an introductory-level course in supervised learning with a focus on regression and classification methods. The course helps students to understand basic concepts, ideas and methods in statistical learning. Considerable amount of effort is also placed on computational aspects of algorithm implementation. This is a research-intensive (RI) course.

* Probability and Statistics 1 (STA 4442) 3 credits
Prerequisite: MAC 2312
An introductory course treating combinatorics, probability spaces, laws of large numbers, and central limit theorem. An introduction to Markov processes, information theory and applications.

*Prerequisite courses must be completed with grades of "C" or better.

* Probability and Statistics 2 (STA 4443) 3 credits
Prerequisite: STA 4442
Properties of test statistics, estimation and testing, linear models, contingency tables; topics from non-parametric statistics, design of experiments or methods of inference.

* Linear Programming and Game Theory (STA 4618) 3 credits
Prerequisite: MAS 2103
Dantzig's simplex method. Duality. Convexity and optimal strategies. Applications.

* Applied Statistics 2 (STA 4702) 3 credits
Prerequisite: STA 4234
Multivariate statistical methods, including the multivariate normal distribution, component analysis, factor analysis, multivariate analysis of variance and regression, discriminant analysis, and causal modeling. Students will use SAS and/or SPSS statistical software.

Applied Time Series and Forecasting (STA 4853) 3 credits
Prerequisite: STA 4234 or equivalent
Gives a basic introduction to time series and forecasting methods that can be applied to finance, economics, engineering and the natural and social sciences. Topics covered include stationary processes, ARMA models, modeling and forecasting with ARMA processes, spectral analysis and non-stationary and seasonal time series models.

Directed Independent Study (STA 4906) 1-4 credits
Prerequisite: Permission of instructor
Study of topics relating to the special needs and interests of individual students.

Directed Independent Research in Mathematical Sciences (STA 4915) 1-6 credits
Students work closely with research mentors to conduct research and inquiry in Mathematical Sciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Mathematical Sciences (STA 4916) 0-6 credits
Students work closely with research mentors to conduct research and inquiry in Mathematical Sciences. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Special Topics (STA 4930 ) 1-4 credits
Prerequisite: Permission of instructor
Topics of interest to upper-division students.

Statistics Study Abroad (STA 4957)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Mathematics and Statistics Graduate Courses

*Prerequisite courses must be completed with grades of "C" or better.

Introduction to Data Science (CAP 5768) 3 credits
(See Computer Science and Computer Engineering courses, College of Engineering and Computer Science section)

* Multivariable Analysis (MAA 5105) 3 credits
Prerequisites: MAA 4200, MAS 4107
Derivative of a function of several variables, implicit and inverse function theorems, submanifolds of Euclidean space, rank theorem, tangent spaces, the derivative as a linear transformation, differential forms, integration on manifolds, Stokes' Theorem.

* Introductory Analysis 1 (MAA 5228) 3 credits
Prerequisite: MAS 3156 or permission of instructor
Metric space topology, uniform convergence, Arzela-Ascoli theorem, differentiation and integration of single variable functions, power series, Stone-Weierstrass Theorem, measure theory, Lebesgue integral, convergence theorems for the Lebesgue integral, absolute continuity, the fundamental theorem of calculus. 

* Introductory Analysis 2 (MAA 5229) 3 credits
Prerequisite: MAA 5228
Continuation of topics in MAA 5228. Metric space topology, uniform convergence, Arzela-Ascoli theorem, differentiation and integration of single variable functions, power series, Stone-Weierstrass Theorem, measure theory, Lebesgue integral, convergence theorems for the Lebesgue integral, absolute continuity, the fundamental theorem of calculus.

* Real Analysis  (MAA 6306) 3 credits
Prerequisite: MAA 5229
Abstract measure theory. The Lebesgue integral. Convergence. Radon Nikodym and Fubini theorems. Lp spaces and selected topics.

Complex Analysis 1 (MAA 6406) 3 credits
Prerequisite: MAA 5228
The complex plane and its geometry, stereographic projection and linear fractional transformations, analytic and harmonic functions, contour integration, Cauchy's theorem and the calculus of residues, and special functions and conformal mapping.

Topics in Real and Complex Analysis (MAA 6416) 1-4 credits
Prerequisite: Permission of instructor
Advanced treatment of topics such as theory of distributions, Fourier analysis, and special functions. May be repeated for credit.

*Prerequisite courses must be completed with grades of "C" or better.

* Introduction to Functional Analysis (MAA 6506) 3 credits
Prerequisites: MAS 5145, MAA 5228, and MAA 5229
Introduction to the theory of functional analysis. Normed linear spaces, Hilbert spaces, Hahn-Banach Theorem, Open Mapping Theorem, Uniform Boundedness Principle, weak convergence, bounded linear operators. Applications to partial differential equations.

* Introductory Combinatorics (MAD 5202) 3 credits
Prerequisites: MAC 2313 and MAD 2104 or permission of instructor
An introductory course in combinatorics; graphs and networks, enumeration, lattices, designs, codes, applications, and proof techniques.

* Introduction to Cryptology and Information Security (MAD 5474) 3 credits
Classical ciphers and their analysis; unconditional versus computational security; basic constructions for stream ciphers; examples and modes of operation of block ciphers; cryptographic hash functions; public key encryption with ElGamal and RSA; digital signature schemes; Diffie-Hellman key exchange.

Introductory  Discrete Mathematics (MAD 6108) 3 credits
Prerequisite: Enrolled in M.S.T. program or permission of instructor
Topics include sets, logic, graph theory, algorithms, counting, recurrence equations and generating functions. Advanced topics may be chosen from partially ordered sets, Boolean algebras, automata and game theory. This course is not intended for Ph.D. students.

Enumerative Combinatorics (MAD 6206) 3 credits
Prerequisite: Permission of instructor
Introduction to enumeration. Sets and multisets, permutations, sieve methods, partially ordered sets, lattices, incidence algebra, Moebius inversion, and generating functions.

* Combinatorics 2 (MAD 6207) 3 credits
Prerequisite: MAD 6206
Advanced topics in graph theory, enumeration, generating functions and symmetric functions. Students are expected to present material from the textbook and to solve exercises.

*Prerequisite courses must be completed with grades of "C" or better.

Topics in Combinatorics (MAD 6209) 1-4 credits
Prerequisite: Permission of instructor
Advanced treatment of topics such as block designs, coding theory, enumeration, graph theory, matroid theory, and umbral calculus. May be repeated for credit.

* Graph Theory (MAD 6307) 3 credits
Prerequisite: MAS 4107 or MAS 5311
A first graduate course in theory and applications of graphs, including basic properties, algorithms, matchings, network flows, connectivity, colorings, planarity, vector spaces, and polynomials associated with a graph.

Computational Mathematics (MAD 6403) 3 credits
Prerequisite: Graduate standing or permission of instructor
An introduction to some of the fundamental tools and methods of computational mathematics and their applications.

* Numerical Analysis (MAD 6407) 3 credits
Prerequisites: MAA 5105, MAA 5228, and MAS 5145 or permission of instructor
Graduate-level treatment of scientific computing and numerical analysis: floating point number systems, nonlinear systems of equations, function approximation, numerical optimization, numerical methods for differential equations.

* Cryptanalysis (MAD 6478) 3 credits
Prerequisites: MAD 6477 or MAD 5474
Entropy, probabilistic attacks. Passive and active attacks. Ciphertext-only, known-plaintext, chosen-plaintext, chosen-ciphertext attacks, adaptive attacks. Types of security. Know attacks on computationally secure systems. Meet in the middle attacks. Differential and linear cryptanalysis. Random number generators, tests, analysis and weakness.

* Coding Theory (MAD 6607) 3 credits
Prerequisites: MAS 4301 or permission of instructor
Channels, introduction to information theory, Shannon's capacity theorem, linear codes, Hamming, cyclic codes, BCH codes, sphere packings, the Golay codes, weight enumerators, MacWilliams' equation.

*Prerequisite courses must be completed with grades of "C" or better.

Topics in Mathematics for Teachers (MAE 5935) 1-4 credits
*Prerequisite courses must be completed with grades of "C" or better.

* Introduction to Dynamical Systems and Chaos 1 (MAP 6211) 3 credits
Prerequisite: Engineering Mathematics 2
Scalar autonomous equations, elementary bifurcations, scalar maps, one-dimensional chaos, scalar non-autonomous equations, bifurcations of periodic equations, equations on tori and circle maps, planar autonomous systems.

* Ordinary Differential Equations (MAP 6336) 3 credits
Prerequisites: MAA 5228 and MAS 5145, or permission of instructor
Introduction to the theory of ordinary differential equations (ODEs), including existence, uniqueness, continuous dependence of solutions, the Hartman-Grobman Theorem, the Stable Manifold Theorem, the Poincare-Bendixson Theorem, and Floquet Theory. Applications to mechanical and biological systems.

* Partial Differential Equations (MAP 6345) 3 credits
Prerequisite: MAA 5105
Introduction to the theory of partial differential equations. Laplace's Equation, the Heat Equation, the Wave Equation, first order equations, The Fourier Transform, Sobolev spaces, the Sobolev embedding theorems, and second order elliptic equations.

Topics in Applied Mathematics (MAP 6436) 1-4 credits
Prerequisite: Permission of instructor
Advanced treatment of topics including ordinary and partial differential equations, potential theory, the calculus of variations, and optimal control theory. May be repeated for credit.

Internship in Applied Mathematics (MAP 6941) 1-6 credits
Prerequisites: Graduate level and permission of instructor
Supervised internships individually assigned to accommodate graduate students' professional development in applied mathematics. May be repeated for a maximum of 6 credits.

* Linear Algebra (MAS 5145) 3 credits
Prerequisite: MAS 4107
Linear transformations, eigenvalues and eigenvectors, characteristic and minimal polynomials, rational and Jordan canonical forms, determinants, quadratic forms, orthogonal diagonalization of symmetric matrices, unitary and Hermitian transformations.

* Introductory Abstract Algebra 1 (MAS 5311) 3 credits
Prerequisite: MAS 4301 or permission of instructor
Groups, subgroups, and homomorphisms, the Sylow theorems, the structure theorem for finite abelian groups, elementary theory of fields and polynomial rings, the fundamental theorem of Galois theory.

* Introductory Abstract Algebra 2 (MAS 5312) 3 credits
Prerequisite: MAS 5311 or permission of instructor
Continuation of MAS 5311. Groups, subgroups, and homomorphisms, the Sylow theorems, the structure theorem for finite abelian groups, elementary theory of fields and polynomial rings, the fundamental theorem of Galois theory.

* Algebraic Number Theory (MAS 6215) 3 credits
Prerequisites: MAS 5311, 5312
The structure of the ring of integers in an algebraic number field; extension of primes and decomposition into products of prime ideals, action of the Galois group on these decompositions, bonds on the size of the ideal class group and the structure of the group of units.

*Prerequisite courses must be completed with grades of "C" or better.

Number Theory and Cryptography (MAS 6217) 3 credits
Elementary number theory with applications to cryptography, including: congruences and modular arithmetic, finite fields, public key cryptography (RSA), primality testing and factoring.

* Algebraic Curves (MAS 6315) 3 credits
Prerequisites: Graduate standing; MAS 5311 and MAS 5312
An introduction to algebraic curves. Topics include affine algebraic sets and varieties, local properties of plane curves, projective varieties, morphisms and rational maps.

* Advanced Algebra and Geometry (MAS 6318) 3 credits
Prerequisites: MAS 2103 and MAS 4301
Integrative treatment of advanced topics in classical algebra and geometry. Not intended for students in the Ph.D. program in mathematics.

* Commutative Algebra (MAS 6333) 3 credits
Prerequisites: Graduate standing; MAS 5311 and MAS 5312
An introduction to commutative rings. Topics include ideals, modules, rings and modules of fractions, integral dependence and valuations and chain conditions (Noetherian and Artinian rings).

Topics in Algebra (MAS 6396) 1-4 credits
Prerequisite: Permission of instructor
Advanced treatment of topics such as field theory and Galois theory, finite groups, abelian groups, ring theory, commutative rings, cohomology of algebraic systems and ordered algebraic structures. May be repeated for credit.

Special Topics (MAT 5932) 1-4 credits
Prerequisite: Permission of instructor
Lectures on advanced specialized topics. May be repeated for credit.

Seminar in Mathematics (MAT 5938) 0-4 credits
Prerequisite: Permission of instructor
This course is a graduate problem-solving seminar, intended to prepare students for the Ph.D. qualifying exams in algebra and analysis. A variety of problems is assigned each week, and students are expected to present and discuss solutions in class.  Grading: S/U

* Supervised University Instruction in Mathematics (MAT 5946) 1-3 credits
Prerequisite:  Permission of insructor
Guidance and supervised practice in the art of lecturing undergraduate mathematics. May be repeated once for credit.  Grading: S/U

* Problem Solving and Recreational Mathematics (MAT 6516) 3 credits
Prerequisites: MAA 4200 and MAS 4301
Introduction to mathematical problem solving literature, principles and methods of problem solving, and analysis of selected famous problems in recreational mathematics. Not intended for students in the Ph.D. program in mathematics.

* Mathematics and Technology (MAT 6715) 3 credits
Prerequisites: MAS 2103 and MAA 4200
Technology has the potential to enhance the understanding and emphasize the interconnectedness of mathematics. This class explores applications of different classes of computer software. The student learns how appropriate technology can be used to present, explore, and build mathematical intuition. This course is not intended for students in the Ph.D. program in mathematics.

*Prerequisite courses must be completed with grades of "C" or better.

Directed Independent Study (MAT 6907) 1-4 credits
Prerequisite: Permission of instructor
Advanced topics relating to the special needs and interests of individual students.

Special Topics (MAT 6933) 1-4 credits
Prerequisite: Permission of instructor
Topics will vary. May be repeated for credit.

Advanced Seminar in Mathematics (MAT 6939) 1-4 credits
Prerequisite: Permission of instructor
Advanced seminar in mathematics on specialized topics. May be repeated for credit.  Grading: S/U

Master's Thesis (MAT 6971) 1-6 credits

Advanced Research in Mathematics (MAT 7978) 1-9 credits
Prerequisite: Admission to Ph.D. program
Research that is focused and relevant to the student's course of study in the Ph.D. program in Mathematics. The course requires oversight by the student's dissertation advisor.  Grading: S/U

Dissertation (MAT 7980) 1-12 credits
Prerequisite: Admission to doctoral candidacy

Topics in the History of Mathematics (MHF 6405) 3 credits
Studies of English translations of various mathematical classics from ancient to modern times, covering a wide range of various mathematical ideas relevant to the teaching of mathematics at the high school level.

Calculus from a Historical Perspective (MHF 6410) 3 credits
Selected topics in calculus from the historical point of view including Archimedes' quadrature of the parabola, the calculation of Pi, the Bernoulli numbers, and sums of powers of numbers.

* Advanced Euclidean Geometry (MTG 6226) 3 credits
Prerequisites: MAS 2103 and MAS 4301
Emphasizes the uses of homogeneous barycentric coordinates in triangle geometry and of dynamic software to explore basic theorems and problems. Not intended for students in the Ph.D. program in mathematics.

Applied Differential Geometry (MTG 6256) 3 credits
Prerequisite: MAA 5105
Differentiable manifolds, affine connections, tensor analysis, Riemannian geometry and Lie groups, with applications to physics and complex variables.

General Topology 1 (MTG 6316) 3 credits
Basic axioms and concepts of point-set topology, Tietze extension theorem, Urysohn lemma, Tychonoff theorem.

*Prerequisite courses must be completed with grades of "C" or better.

* Applied Computational Topology (MTG 6329) 3 credits
Prerequisites: MAS 2103 and (MAD 2502 or CAP 5768)
An introduction to the computational methods of topology, focusing on topological data analysis, persistence homology and applications.

* Algebraic Topology (MTG 6345) 3 credits
Prerequisites: MAA 5228, MAA 5229, MAS 5311, and MAS 5312
An introduction to the fundamental concepts and basic methods of algebraic topology: homotopy, homology, and cohomology of cell complexes and their applications to geometry and algebra.

Fractal Geometry (MTG 6415) 3 credits
Prerequisite: Permission of instructor
Fractal geometry describes the seemingly irregular shapes and patterns we encounter in the natural world. This course explores the mathematical concepts behind fractal geometry and gives numerous applications of integration of mathematics with the natural world.

Dynamical Systems, Chaos, and Computing (MTG 6418) 3 credits
Prerequisite: Permission of instructor
Students reconstruct some modern mathematical discoveries in dynamical systems using widely accessible programs such as spreadsheets and dynamical geometry software. Explorations illustrate the relation of chaos theory to iteration of second order polynomials and fractal geometry as well as general mathematical patterns.

* Biostatistics (STA 5195) 3 credits
Prerequisite: STA 4234
An introduction to statistical tools used routinely for inference and data analysis in the health sciences. Topics include biostatistical design of medical studies, measure of disease occurrence and association, methods for rates and proportions, ROC analysis for screening and diagnosis, discrimination and classification, principal component analysis and factor analysis, log-linear models and survival analysis.

* Statistical Computing (STA 6106) 3 credits
Prerequisite: STA 4443 or equivalent
Algorithms in statistical computing: Random number generation, generating other distributions, random sampling and permutations. Matrix computations in linear models. Non-linear optimization with applications to statistical procedures. Other topics of current interest, such as issues of efficiency and use of graphics.

Survey of Statistics and Probability (STA 6116) 3 credits
Prerequisite: Enrolled in M.S.T. program or permission of instructor
Topics include graphical analysis of data, statistical inference and modeling, analysis of variance and the design of experiments. Not intended for Ph.D. students in mathematics.

* Survival Analysis (STA 6177) 3 credits
Prerequisite: STA 4234 or equivalent
Introduces basic concepts of clinical trials, then the principles and methods of statistical inference that are commonly used for epidemiologic analysis of survival data. The major topics covered are: Basic concepts in survival analysis, types of censoring, life table and Kaplan-Meier, log-rank method and Cox proportional model. Software package R language is utilized.

* Biostatistics - Longitudinal Data Analysis (STA 6197) 3 credits
Prerequisite: STA 4234
Course covers techniques for analyzing longitudinal or repeated measured data, including derivation and estimation of model parameters. Also covers univariate and multivariate analysis of variance for repeated measures, random or mixed-effect models, covariate pattern models, generalized estimating equations models, mixed-effect logistic regression models, and missing data in longitudinal studies.

* Applied Statistical Methods (STA 6207) 3 credits
Prerequisite: STA 4443 or STA 6326 or equivalent
Overviews of normal theory inference and categorical data methods; basic concepts of experimental design; analysis of variance and covariance; introduction to regression models and selection procedures. Statistical software Minitab and R are used for data analysis.

* Regression Analysis (STA 6236) 3 credits
Prerequisites: STA 4032 or STA 4443 and senior or graduate standing
This course provides basic theory, methods and applications of regression analysis. Topics covered include simple regression (least squares method), multiple regression, transformation, inference and correlation analysis, categorical variables, residual diagnostics, model building and multi-collinearity.

* Mathematical Statistics (STA 6326) 3 credits
Prerequisite: STA 6444
Theory of inference, regression, ANOVA, robust procedures, or other selected topics.

* Mathematical Probability (STA 6444) 3 credits
Prerequisite: STA 4443
Theory of random variables, stochastic processes, Brownian motion, renewal processes, martingales, or other selected topics and applications.

Topics in Probability and Statistics (STA 6446) 1-4 credits
Advanced treatment of topics from stochastic processes, limit laws, decision theory, and sequential methods. May be repeated for credit.

* Applied Time Series Analysis (STA 6857) 3 credits
Prerequisite: STA 4234
This course introduces fundamental concepts and some common models for time series data. Topics include stationarity, autocovariance function and spectrum, integral representation of a stationary time series and interpretation, ARMA, ARIMA and GARCH models, estimation and forecasting, multivariate time series, using R for the analysis of time series, and applications of time series.

Directed Independent Study (STA 6907) 1-4 credits
Study of topics relating to the special needs and interests of individual students.

* Prerequisite courses must be completed with grades of "C" or better.

Physics

Undergraduate Courses /link to graduate courses

Introduction to Astronomy (AST 2002) 3 credits
This course provides a comprehensive look at modern astronomy, emphasizing the use of the scientific method and the application of physical laws to understand the Universe including Earth and its environment. Throughout this course, students develop the ability to discern scientific knowledge from non-scientific claims by using critical thinking. Designed for non-science majors; no credit for Physics B.S. majors. This is a General Education course.

Astronomy and Astrophysics (AST 3018) 3 credits
Prerequisites: AST 2002 and (PHY 2048 or PHY 2053)
Corequisite: PHY 2048 or PHY 2053
Survey of astronomy and astrophysics for physical science, engineering or mathematics majors. Covers a broad range of astronomical topics from orbital mechanics to cosmology. Focuses on explaining astrophysical processes through observation and theoretical models.

Solar System Astronomy (AST 3110) 3 credits
Prerequisites: AST 2002 and (PHY 2048 or PHY 2053)
Corequisite: PHY 2048 or PHY 2053
An intermediate, interdisciplinary course on the nature and dynamics of the solar system through applications of physics, atmospheric science, chemistry and geology. The course expands students' understanding of the different bodies in the solar system, of the fundamental principles of Earth processes to explain/predict processes on other bodies in or outside the solar system and to help them to consider the bodies for future exploration. 

Techniques of Observational Astronomy (AST 3722) 3 credits
Prerequisites: AST 2002 and (PHY 2048 or PHY 2053)
Corequisite: PHY 2048 or PHY 2053
An in-depth treatment of how professional astronomers gather, reduce, analyze and interpret observations, mostly focused on the optical/infrared portion of the electromagnetic spectrum.

Stars and the Galaxy (AST 4300) 3 credits
Prerequisites: AST 2002 and (PHY 2048 or PHY 2053)
Corequisite: PHY 2048 or PHY 2053
Course provides a solid foundation in the subject of stellar structure and how it relates to our understanding of the Milky Way and its neighbors in the Local Group. The approach concentrates largely on the stellar populations of these systems, the techniques used to study their chemical abundances, ages and distances.

Galaxies and Cosmology (AST 4402) 3 credits
Prerequisites: AST 2002 and (PHY 2048 or PHY 2053)
Corequisite: PHY 2048 or PHY 2053
Study of different types of galaxies, their evolution, their relationship to active galaxies and quasars and the evolution of the Universe.

First-Year Physics Seminar (PHY 1090) 1 credit
This course introduces beginning Physics majors to the department, its faculty, resources and research opportunities.

University Honors Seminar in Physics (PHY 1930) 1-4 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in physics.

Physics for Engineers 2 (PHY 2044) 3 credits
Prerequisites: MAC 2312 and PHY 2048
Intended for engineering majors, the course surveys fundamental laws and phenomena of electricity, magnetism, and optics. Emphasis on mathematical analysis of physical problems.

General Physics 1 or General Physics for Engineers 1 (PHY 2048) 3 or 4 credits
Prerequisite: MAC 2311
This calculus-based course serves as the first in a two-part series, covering topics like kinematics, dynamics, energy, momentum, rotational motion, fluid dynamics, oscillatory motion and waves. Designed for science and engineering majors, the course integrates critical thinking, analytical skills and real-world applications. The 3-credit version of this class is exclusively for Engineering majors. This is a General Education course. 

General Physics 1 Laboratory (PHY 2048L) 1 credit
Corequisite: PHY 2048 or PHY 2053
Experiments in mechanics, fluids, heat, wave motion and sound comprise this course. Several classes cover developing theoretical problem solving techniques. This is a General Education course.

General Physics 2 (PHY 2049) 4 credits
Prerequisites: PHY 2048 and MAC 2312
Intended for science majors, the course surveys fundamental laws and phenomena of electricity, magnetism, and optics. Emphasis on mathematical analysis of physical problems.

General Physics 2 Laboratory (PHY 2049L) 1 credit
Corequisite: PHY 2049 or PHY 2054 or PHY 2044
Experiments in electricity and magnetism, optics, and modern physics comprise this course. Several classes cover developing theoretical problem solving techniques.

College Physics 1 (PHY 2053) 4 credits
Prerequisite: Minimum grade of "C" in one of the following: MAC 1114 or 1147 or 2233 or 2311
This course is the first in a two-part series intended for non-physics majors, offering an algebra and trigonometry approach to topics such as kinematics, dynamics, energy, momentum, rotational motion, fluid dynamics, oscillatory motion and waves. The course fosters analytical and critical thinking skills to promote a scientific understanding of the real world. No credit for physics majors. This is a General Education course.

College Physics 2 (PHY 2054) 4 credits
Prerequisite: PHY 2053
The algebra- and trigonometry-based course surveys fundamental laws and phenomena of electricity and magnetism, optics, special relativity, atomic and nuclear physics. Emphasis on understanding of physical concepts through examples drawn from the physical and life sciences. No credit for physics majors.

Physics Study Abroad (PHY 2952) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Survey of Modern Physics (PHY 3101C) 3 credits
Prerequisites: PHY 2049 and (MAP 3305 or MAP 2302)
Survey of the quantum and statistical theories underlying modern physics as well as an overview of atomic and nuclear physics. The in-class lecture section will be complemented by experimental and computational exercises. (Change effective spring 2025.)

Classical Mechanics (PHY 3221) 3 credits
Prerequisites: PHY 2048 and (MAP 3305 or MAP 2302)
This course covers analytical mechanics through the Lagrangian and Hamiltonian variational formalisms. It emphasizes problem solving in applications to central-force and rigid-body motion as well as small oscillations. (Change effective spring 2025.)

Electromagnetism 1 (PHY 3323) 3 credits
Prerequisite: PHY 2049, MAC 2313
Study of dynamic fields and the unification of electric and magnetic phenomena. Emphasis on induction and radiation phenomena with applications to optics and relativistic electrodynamics. 

Electromagnetism 2 (PHY 3324 ) 3 credits
Prerequisite: PHY 3323
This course studies dynamic fields and the unification of electric and magnetic phenomena. In particular, it considers induction and radiation phenomena as well as topics in optics and relativistic electrodynamics.

Physical Electronics (PHY 3722C) 3 credits
Prerequisite: PHY 2049
A series of interrelated lectures and laboratory exercises that studies D.C. and A.C. circuits, transistors, vacuum tubes, rectifiers, amplifiers, oscillators, and pulse circuits. Emphasis on building circuits, including integrated circuits. 

Undergraduate Laboratory 1 (PHY 3802L) 1-2 credits
Prerequisite: PHY 3101C
A series of laboratory experiments in classical and modern physics, electrical measurement techniques, and optics, with applications to problems in atomic, nuclear, and solid-state physics comprise this course.

Third-Year Physics Seminar (PHY 3932) 1 credit
Prerequisite: PHY 3101C
Focuses on career development for upper-division Physics majors. Topics covered include graduate school applications, CV/résumé development and undergraduate research opportunities.

Statistical Physics (PHY 4523) 3 credits
Prerequisites: PHY 3101C
An introduction to the statistical mechanics and thermodynamics of macroscopic systems in equilibrium. This course develops various ensemble theories and uses them to study the physical properties of classical and quantum ideal gases, crystals, magnetic materials and other systems. 

Quantum Mechanics 1 (PHY 4604) 3 credits
Prerequisite: PHY 3101C
This course introduces the modern theory of quantum mechanics. It studies both wave and matrix mechanics as well as their interrelation in the modern theory. Applications studied include particle systems, the simple harmonic oscillator, and the hydrogen atom. 

Quantum Mechanics 2 (PHY 4605) 3 credits
Prerequisite: PHY 4604
Continuation of the development of modern quantum mechanics with emphasis on approximation methods suitable for analyzing more realistic quantum systems. Course also examines one or more advanced topics of current interest in the field.

Undergraduate Laboratory 2 (PHY 4803L) 1 credit
Prerequisite: PHY 3101C
Continued laboratory experiments in classical and modern physics, electrical measurement techniques and optics, with applications to problems in atomic, nuclear and solid-state physics.

Directed Independent Study (PHY 4905) 1-3 credits
Prerequisite: Permission of instructor
Study of topics in physics relating to the special needs and interests of individual students.

Undergraduate Research (PHY 4910) 1-6 credits
Prerequisite: Permission of instructor
This course offers credit to undergraduates participating in current research within the department.

Special Topics (PHY 4936) 1-4 credits
Prerequisite: Permission of instructor
Lectures and directed reading on topics of contemporary interest in physics.

Physics Study Abroad (PHY 4957) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Undergraduate Thesis (PHY 4972) 3-6 credits
Prerequisite: Permission of instructor
This course offers credit to undergraduates participating in current research within the department and preparing a final activity report. Undergraduate theses must be approved by research supervisors and the department chair, but need not be defended.  Grading: S/U

Computational Physics (PHZ 3151C) 3 credits
Prerequisites: MAC 2313, PHY 3101C
The course covers selected topics in numerical computation and computer-assisted analysis, with applications to physical systems. 

Mathematical Methods for Physics (PHZ 4113) 3 credits
Prerequisite: MAP 3305
This course develops applied mathematics for the physical sciences. It introduces integral transform, Green's function and orthogonal function expansion methods for solving differential equations. It also examines selected advanced topics, such as complex variables.

Introduction to Biophysics (PHZ 4710) 3 credits
Prerequisites: PHY 2054 or PHY 2049 or equivalent
An introductory survey of the ideas and application of physics in the realm of biology. Accessible to both Physics and Biology students. Emphasis is placed on how the ideas and tools of statistical physics can be used to give physical insights into complex biological problems with the aim of reaching new levels of quantitative understanding and prediction.

Physical Science (PSC 2121) 3 credits
A self-contained course for non-science majors that emphasizes analytical thinking and problem solving. It covers essential concepts in astronomy, physics, chemistry, geology and meteorology. No credit for both PSC 2121 and one of PHY 2043, PHY 2048 or 2053. This is a General Education course.

Physics Graduate Courses

Directed Independent Study (AST 6907) 1-3 credits
Independent study of advanced topics supervised by a member of the Physics faculty. 

Topics in Physics (PHY 5935) 1-4 credits
An intensive study of topics of special interest to inservice teachers. It provides no credit toward a major in Physics.

Special Topics (PHY 5937) 1-4 credits
Prerequisite: Permission of instructor
Lectures and directed reading in advanced physics.

Mechanics (PHY 6247) 3 credits
Classical mechanics from the advanced standpoint: Hamilton's principle, Lagrange's and Hamilton's equations, canonical transformations, Hamilton-Jacobi equations, and integral invariants.

Electromagnetism (PHY 6346) 3 credits
Boundary-value problems in electrostatics, magnetostatics and steady currents; it looks at multipoles, dielectrics, Maxwell's equations, and energy and momentum of the electromagnetic field.

Electromagnetic Fields (PHY 6347) 3 credits
Prerequisite: PHY 6346
Plane electromagnetic waves and wave propagation, wave guides, simple radiating systems, radiation from moving charges, and scattering and multipole fields.

Statistical Mechanics (PHY 6536) 3 credits
Theory and application of classical and quantum statistical mechanics.

Quantum Mechanics 1 (PHY 6645) 3 credits
Fundamental concepts of quantum mechanics, quantum dynamics, angular momentum, exactly solvable three-dimensional problems, symmetry in quantum mechanics, approximation methods, scattering theory.

Quantum Mechanics 2 (PHY 6646) 3 credits
Prerequisite: PHY 6645
Advanced concepts of quantum mechanics, many-particle theory and the local density approximation, introduction to relativistic and quasi-relativistic quantum theory, time-dependent perturbation theory and the interaction of particles with radiation.

Quantum Field Theory 1 (PHY 6668) 4 credits
Prerequisite: PHY 6645
Introduction to relativistic particle equations (Klein-Gordon, Dirac, Maxwell, Proca); classical field theory (Euler Lagrange equations and Noether's theorem); symmetries and invariances; introduction to field quantization; quantization of the Klein-Gordon, Dirac and Maxwell fields; covariant commutation relations; S-matrix expansion; Wick's theorem; QED S-operators and S-matrix elements to second order.

Quantum Field Theory 2 (PHY 6669) 3 credits
Prerequisite: PHY 6668
Cross sections, Spin sums, polarization sums, trace theorems; calculation of QED interactions; radiative corrections; renormalization; introduction to weak interactions; leptonic weak interactions; IVB theory; gauge theory of weak interactions; the Goldstone model; the Higgs model; standard electro-weak theory.

Directed Independent Study (PHY 6907) 1-3 credits
Independent study of advanced topics supervised by a member of the Physics faculty. 

Graduate Research (PHY 6918) 1-12 credits
Prerequisite: Permission of instructor
Supervised research in physics for master's degree.  Grading: S/U

Graduate Colloquium (PHY 6920) 1 credit
Prerequisite: Permission of instructor
This includes lectures and discussion on current topics in physics by graduate students, faculty, or visitors.  Grading: S/U

Special Topics (PHY 6938) 1-4 credits
Lectures and reading in physics.

Master's Thesis (PHY 6971) 1-12 credits
Prerequisite: Permission of graduate coordinator
Grading: S/U

Advanced Research in Physics (PHY 7978) 1-9 credits
Prerequisite: Admission to Ph.D. program
Research that is focused and relevant to the student's course of study in the Ph.D. program in Physics. The course requires oversight by the student's dissertation advisor.  Grading: S/U

Dissertation (PHY 7980) 1-12 credits
Prerequisite: Admission to doctoral candidacy
Grading: S/U

Mathematical Physics (PHZ 5115) 3 credits
Further topics in mathematical physics including: solution of partial differential equations by Greens functions, perturbation theory, integral equations, calculus of variations, and topics of special interest.

Mathematical Physics 2 (PHZ 5116) 3 credits
Topics in mathematical physics including: complex variables, calculus on manifolds, Riemannian geometry, Lie groups, connections and curvature on fiber bundles, and/or selected topics of special interest.

Computational Physics (PHZ 5156) 3 credits
Prerequisite: Two semesters of calculus or permission of instructor
Introduction to the use of numerical methods to solve realistic physics problems. Emphasis on good programming techniques and on obtaining insight into the problem rather than just numerical answers. Discussion of recent developments such as distributed and symbolic computing.

Introduction to Biophysics (PHZ 5715) 3 credits
Prerequisites: PHY 2049 or PHY 2054 or equivalent
A survey of the ideas and application of physics in the realm of biology designed to be accessible to physics or biology students. Emphasis on how the ideas of statistical physics can be used to give physical insights into complex biological problems with quantitative understanding and prediction.

Numerical Relativity (PHZ 7609) 3 credits
Prerequisite: PHY 6938 (General Relativity)
Offers an introduction to the mathematical formalisms employed to solve the Einstein equations numerically.

Radiation Biology (RAT 6204) 3 credits
Prerequisite: Permission of instructor
An overview of the effects of ionizing radiations on human and other biological systems. The course involves consideration of cell survival after exposure to ionizing radiations, repair of radiation damage, radiosensitizers and radioprotectors, doses and risks in diagnostic radiology, cardiology, nuclear medicine and basic safety rules. A student seminar is required at the end of the course.

Radiation Protection and Safety (RAT 6310) 3 credits
Prerequisite: Permission of instructor
Course provides students with the knowledge and technical background to understand the calculation methodology, compliance with safety standards and use of quantitative risk assessment for radiation protection and safety.

Shielding and Commissioning (RAT 6376) 3 credits
Prerequisite: Permission of instructor
Covers the science of opening a new radiation oncology center. Covers shielding calculations, installing and running the acceptance testing of a linear accelerator, high dose rate brachytherapy afterloader, CT simulator, treatment planning systems, commissioning of the treatment planning systems.

Medical Imaging Physics ( RAT 6616 ) 3 credits
Prerequisite: Graduate standing
Course covers the mathematical and physical principles of medical imaging and its applications as recommended by the AAPM. Students obtain a good understanding of Radiography, Computed Tomography (CT), Magnetic Resonance Imaging (MRI), Ultrasound Imaging (US), Fluorescence and Nuclear Medical Imaging.

Radiation Therapy Physics (RAT 6628) 3 credits
Introductory course with a clinical orientation that reviews the rationale, basic science, methods, and applications of radiation therapy to the treatment of human diseases. Low- and high-energy photon therapy, electron and proton therapy, and low- and high-dose rate brachytherapy.

Advanced Photon Beam Radiation Therapy (RAT 6629) 3 credits
Prerequisite: RAT 6628
Course covers the physics and clinical application of advanced external beam photon therapies with special emphasis on IMRT (Intensity Modulated Radiation Therapy).

Radiation Physics (RAT 6686) 3 credits
Course covers the basics of ionizing and non-ionizing radiation, atomic and nuclear structure, basic nuclear and atomic physics, radioactive decay, interaction of radiation with matter, radiation detection, and dosimetry.

Nuclear Medical Physics ( RAT 6687 ) 3 credits
Prerequisite: Permission of instructor
Covers the fundamentals of nuclear physics and its application in the medical field as recommended by the AAPM. Students gain understanding of the physics and instrumentation of nuclear medicine.

Directed Independent Study (RAT 6904) 1-3 credits
Prerequisite: Permission of instructor
Guided study of advanced topics in medical physics relating to particular needs of individual students.

Directed Independent Study (RAT 6907) 1-3 credits
Independent study of advanced topics supervised by a member of the Physics faculty. 

Seminar in Medical Physics (RAT 6932) 1 credit
Prerequisite: Permission of instructor
Includes lectures and discussion on current topics in medical physics by faculty, graduate students and visitors.  Grading: S/U

Radiation Therapy: Clinical Practicum and Shadowing (RAT 6947) 3 credits
Prerequisites: RAT 6628, RAT 6629
Application of medical physics to cancer therapy in a hospital setting under close supervision. Dosimetry, calibrations, commissioning, radiation survey, and treatment planning. Clinically
oriented laboratory-type projects are assigned.  Grading: S/U

Master's Thesis (RAT 6975) 7 credits
Prerequisite: Permission of advisor
Research supervised by the thesis advisor.  Grading: S/U

Psychology

Undergraduate Courses /link to graduate courses

Comparative Animal Behavior (CBH 4024) 3 credits
Prerequisite: PSY 1012, BSC 1010
An introduction to the evolution and adaptive significance of animal behavior. Topics include traditional and modern ethological concepts; sensory function; orientation, migration and communication; territoriality and animal social behavior.

Psychopathology (CLP 4144) 3 credits
Prerequisite: PSY 1012
Understanding of so-called physical and mental illness by means of conventional and common path theories.

Clinical Psychology (CLP 4343) 3 credits
Prerequisite: PSY 1012
Provides an understanding of the practice of modern clinical psychology. Students will be able to understand the theory and application of evidence-based practice in clinical psychology, including assessment, treatment, forensic settings, healthcare applications and organizational consulting.

Forensic Psychology (CLP 4390) 3 credits
Prerequisite: PSY 1012 with minimum grade of "C-"
This course provides an introduction to forensic psychology – the application of psychological science and professional psychological practice to the law to inform a pending legal decision. “Forensic” comes from the Latin word for “court,” and “forensic psychologists” are psychologists who help courts make decisions about people when some question related to psychology is involved. Thus, forensic psychologists are typically involved in cases “preadjudication,” which means before the legal decision is made.  

Psychology of Human Development (DEP 3053) 3 credits
Prerequisite: PSY 1012
Examines changes in behavior over the course of development and the processes underlying these changes. All major areas of child development are reviewed, including cognitive, social/personality, language, and biological, with attention to development in adolescence and adulthood.

Personality and Social Development (DEP 4095) 3 credits
Prerequisites: PSY 1012 and DEP 3053
A review of psychological theory and research on age trends and individual differences in personality and social development.

Infant Development (DEP 4115) 3 credits
Prerequisites: PSY 1012 and DEP 3053
Corequisite: DEP 3053
This course provides an overview of the field of infant development with a particular focus on behavioral development. Topics to be considered are physical, physiological, sensory, perceptual, and cognitive development during the first year of life in humans and other species.

Language Acquisition (DEP 4130) 3 credits
Prerequisites: PSY 1012 and DEP 3053
A broad background course in the psychological aspects of language and its acquisition. Topics include the psychology and acquisition of grammar, word meaning, reading comprehension, and conversational rules, among others.

Cognitive Development (DEP 4163) 3 credits
Prerequisites: PSY 1012 and DEP 3053
An examination of psychological research and theory of age changes in children's thinking. Topics include Piagetian theory and concept and memory development.

Psychology of Adolescence (DEP 4305) 3 credits
Prerequisite: PSY 1012
A topical study of adolescent behavioral and psychological development with emphasis on theory, methods of inquiry, and practical implications.

Human Development Laboratory (DEP 4797C) 3 credits
Prerequisite: DEP 3053
Students participate in research activities and seminar discussions that illustrate current methods in the psychological study of human development. Firsthand research experiences and related readings provide exposure to and training in the practice of human developmental research applied to different age periods and domains.

Cognition (EXP 3505) 3 credits
Prerequisites: PSY 1012 and PSY 3234 with minimum grade of "C-"
Corequisite: PSY 3234 with minimum grade of "C-"
Experimental and theoretical aspects of human learning and cognition. Topics include attention, human learning and memory, organization of knowledge, concept formation and problem solving.

Human Perception (EXP 4204) 3 credits
Prerequisites: PSY 1012 and either EXP 3505 or PSB 3002
The development of theoretical models of human perception on the basis of experimental research into visual sensory systems, the perception of movement and space, and differential information processing capacities.

Psychology of Motivation (EXP 4304) 3 credits
Prerequisite: PSY 1012
A critical examination of the concept of motivation as an explanatory mechanism in understanding behavior.

Psychology of Learning (EXP 4404) 3 credits
Prerequisite: PSY 1012 and PSY 3213
Lectures concerned with problems, methods and content in the area of learning.

Human Memory (EXP 4525) 3 credits
Prerequisite: PSY 1012
This course presents psychological research and theory related to human memory. Multiple memory systems are discussed, including short-term or working memory, long-term memory, procedural memory, implicit memory, and semantic memory. Different populations of memory users are also discussed, including children, older adults, and amnesics.

Cognition Laboratory (EXP 4934C) 3 credits
Prerequisites: PSY 1012 and EXP 3505 (may be taken concurrently)
Students apply knowledge of cognitive psychology to the testing of scientific hypotheses, improve skills in oral and written reports, and obtain firsthand experience with the ways that cognitive psychologists use computers to conduct research.

Industrial Organizational Psychology (INP 4003) 3 credits
Prerequisite: PSY 1012 with minimum grade of "C-"
This course describes the applications of psychology to the modern business world, including advertising and marketing, negotiation and selling, customer service, hiring and firing, motivation and teamwork, coaching and discipline, supervision and leadership, organizational stress-management, dysfunctional work behavior, workplace violence and harassment, conflict resolution and crisis management, organizational culture and business ethics, and careers in business psychology and corporate consulting. 

Interpersonal Processes (PCO 4734) 3 credits
Prerequisites: PSY 1012 and either PSY 3213 or PSY 3234
An examination of psychological processes involved in the development, maintenance and dissolution of interpersonal relationships.

Personality Theories (PPE 4003) 3 credits
Prerequisite: PSY 1012
Psychoanalytic, behavioristic and humanistic theories of personality. Primary emphasis on cognitive systems of individuals.

Experimental Studies of Personality (PPE 4700) 3 credits
Prerequisite: PSY 1012
An examination of psychological theory and research on how a variety of personality trait dimensions interact with situations to determine social behavior.

Biological Bases of Behavior (PSB 3002) 3 credits
Prerequisites: PSY 1012  and PSY 3234 with minimum grade of "C-"
Corequisite: PSY 3234 with minimum grade of "C-"
A study of the structures and functions of the neural and endocrine systems as they relate to behavior.

Computer Lab in Psychobiology (PSB 3002L) 3 credits
Prerequisite: PSB 3002
Computer-based system of instruction that covers cell biology, electrical theory, resting-membrane potentials, action potentials, synaptic potentials, neuroanatomy and neurochemistry, and sensory systems.

Biological Bases of Behavior 2 (PSB 4006) 3 credits
Prerequisite: PSB 3002
A survey of the biological bases of specific species-typical behaviors such as sleep, language and memory, ingestive behaviors, reproductive behavior, emotion and stress, and human communication.

Neuropsychology (PSB 4240) 3 credits
Prerequisites: PSY 1012 and PSB 3002
Explores the fundamentals of human neuropsychology, including the effects of brain damage on memory, language and spatial behavior, development and recovery of function.

Human Psychophysiology (PSB 4323) 3 credits
Prerequisite: PSB 3002
An introduction to the study of human physiological responses (EEG, EKG, etc.) and related psychological processes.

Psychopharmacology (PSB 4444) 3 credits
Prerequisites: PSY 1012 and PSB 3002
An introduction to the major classes of psychoactive drugs and how they affect behavior. Equal emphasis will be given to laboratory and clinical studies.

Developmental Psychobiology (PSB 4504) 3 credits
Prerequisite: PSY 1012
Examines biological and psychological contributions to the development of behavior. Topics include: the concept of innate behavior; critical periods in early development; and selected aspects of motivational development.

RI: Neurobiology of Learning and Memory (PSB 4810) 3 credits
Prerequisites: PSB 3002, PSB 4006, PSY 3213
This course examines contemporary and classical research on the neural substrates of learning and memory. The format includes 50 percent lectures and 50 percent student presentations of research papers. Students work in groups to design and complete a research project during the semester. This is a research-intensive (RI) course.

Neuroscience of Sleep (PSB 4842) 3 credits
Prerequisite: PSB 3002 with minimum grade of "C-"
This course introduces the field of sleep science. Topics addressed include the neurochemistry of sleep, circadian biology, normal sleep physiology, sleep across the lifespan, diagnostic sleep testing, sleep deprivation, sleep disorders and dreams.  

Directed Independent Research in Neuroscience and Behavior (PSB 4915) 1-3 credits
Prerequisite: Permission of instructor
Students work closely with research mentors to conduct research and inquiry in neuroscience and behavior. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.

Directed Independent Research in Neuroscience and Behavior (PSB 4917) 0-3 credits
Prerequisite: Permission of instructor
Students work closely with research mentors to conduct research and inquiry in neuroscience and behavior. Requirements for the course and the criteria for evaluation are agreed upon by the research mentor and the student.  Grading: S/U

Special Topics in Neuroscience and Behavior (PSB 4930) 3 credits
Prerequisite: Permission of instructor
A detailed examination of selected topics of interest to students in neuroscience and behavior.

General Psychology (PSY 1012) 3 credits
In this course, students will gain an introduction to the scientific study of human behavior and mental processes. Topics may be drawn from historical and current perspectives in psychology. This is a General Education course.

University Honors Seminar in Psychology (PSY 1930) 3 credits
Writing Across Curriculum (Gordon Rule)
A seminar in the University Honors Program on topics in psychology.

Special Topics in Psychology (PSY 2930) 1-3 credits
Prerequisite: Permission of department
Selected topics in psychology.

Psychology Study Abroad (PSY 2952)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Careers in Psychology (PSY 3070) 3 credits
Pre- or corequisite: PSY 1012
The purpose of this course is to introduce the discipline of psychology and describe careers that psychology majors typically pursue. 

Research Methods in Psychology (PSY 3213) 3 credits
Prerequisites: PSY 1012  and PSY 3234 with minimum grade of "C-"
Corequisite: PSY 3234 with minimum grade of "C-"
Introduction to research design and methods in psychology. Topics include observation and description of behavior; methods of measurement; and analytic and quasi-analytic experimental design. Laboratory exercises included to illustrate designs and provide experience in research report writing.

Experimental Design and Statistical Inference (PSY 3234) 3 credits
Gordon Rule, computational
Prerequisite: PSY 1012
Interpretation of data and inferential techniques are considered for a variety of experimental paradigms in the life sciences including small and correlated samples.

Cooperative Education - Psychology (PSY 3949) 1-3 credits
Grading: S/U

Multicultural Psychology (PSY 4027) 3 credits
Prerequisite: PSY 1012
Prerequisites or Corequisites: PSY 3213 and PSY 3234
The purpose of this course is to examine cultural processes as a defining characteristic of what it is to be human and as a central, or proximal, variable in psychology. The course is intended to provide students with a better appreciation of the myriad ways in which culture determines psyche and behavior and to enhance their awareness of the countless variation in human behavior across cultures. This course prepares students to navigate modern issues of multiculturalism in a diverse society.

Psychometrics and Psychological Testing (PSY 4302) 3 credits
Prerequisites: PSY 1012 and PSY 3234
Theory and method in personality measurement: reliability, validity, examples of tests used to measure personality traits and other dispositions.

History and Systems of Psychology (PSY 4604) 3 credits
Prerequisite: PSY 1012
Philosophical sources. Emergence of such systems as structuralism, functionalism, behaviorism, and Gestalt psychology and contemporary theory in psychology.

Evolutionary Psychology (PSY 4810) 3 credits
Prerequisite: PSY 1012
Provides a broad overview of historical and modern research and theory in evolutionary psychology, the study of the evolution of the mechanisms of the mind. Topics include mating, parenting, social exchange, and violence.

Directed Independent Study (PSY 4906) 1-3 credits
Prerequisite: Permission of instructor
Grading: S/U

Directed Independent Research in Psychology (PSY 4915) 1-3 credits
Prerequisite: Permission of instructor
Students work with research mentors to conduct research and inquiry in Psychology. Requirements for the course and the criteria for evaluation are agreed upon by the mentor and student.

Directed Independent Research in Psychology (PSY 4916) 0-3 credits
Prerequisite: Permission of instructor
Students work with research mentors to conduct research and inquiry in Psychology. Requirements for the course and the criteria for evaluation are agreed upon by the mentor and student.  Grading: S/U

Special Topics (PSY 4930) 1-3 credits
Prerequisite: Permission of instructor
Selected topics in Psychology.

Honors Seminar (PSY 4932) 3 credits
Prerequisite: Permission of department

Honors Critical Questions in Psychology (PSY 4935) 3 credits
Prerequisites: 3.2 GPA and invitation from faculty (permission of instructor)
An advanced seminar-style course for undergraduate honors students in the B.A. in Psychology or B.S in Neuroscience and Behavior programs, which introduces key concepts on controversial issues from different psychological viewpoints. Topics vary from semester to semester, such as relationship between psychological development and evolution, incidence of violence in society and prosecution of violent acts, and whether or not artificial intelligence is a good model for human intelligence.

Psychology Study Abroad (PSY 4957) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Honors Thesis (PSY 4970) 1-3 credits
Prerequisite: Permission of department
Grading: S/U

Social Psychology (SOP 3004) 3 credits
Prerequisites: PSY 1012  and PSY 3234 with minimum grade of "C-"
Corequisite: PSY 3234 with minimum grade of "C-"
Introduction to psychological theory and research on the nature and causes of human social behavior.

Psychology of Women (SOP 3742) 3 credits
Prerequisite: PSY 1012
Lectures and discussions dealing with the empirical and theoretical literature related to the psychological aspects of sexual differentiation in general, and women in particular.

Social Behavior Laboratory (SOP 4230C) 3 credits
Prerequisite: PSY 1012
Methods and theories relevant to the scientific study of social behavior, with special attention to social attraction, helping and compliance, group productivity, and the spread of social influence in groups and populations. Lecture and laboratory.

Police Psychology (SOP 4750) 3 credits
Prerequisite: PSY 1012 with minimum grade of "C-"
Understand the current applications of psychology to policing and law enforcement, including (1)operational assistance (community policing, crisis negotiation, special units, criminal investigation); (2) clinical services (critical incident response, officer-involved shooting, law enforcement psychotherapy, family services); and (3) administrative and management services (officer selection and screening, fitness-for-duty, discipline and internal investigation). 

Psychology and the Law (SOP 4751) 3 credits
Prerequisite: PSY 1012
Course helps students understand the modern applications of psychology to civil and criminal competencies, torts and personal injury, investigation and interviewing, the insanity defense, criminal classification, juvenile and family law, sexual deviance and violent behavior, offender profiling, dangerousness prediction, trial testimony, jury psychology and the role of the psychologist as expert witness.

Intermediate Statistics Lab (STA 3163L) 1 credit
Gordon Rule, computational
Prerequisites: PSY 1012 and PSY 3234 (may be taken concurrently)
Computer organization, computer implementation of basic and intermediate statistical inferences that include describing data, graphic presentation, analysis of data. Applications will reflect the descriptive and statistical inferences appropriate to the discipline under which this course is offered (e.g., business, education, engineering, mathematics, psychology, etc.).

Social Psychology Study Abroad (SYP 2952) 1-6 credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Social Psychology Study Abroad (SYP 4957)  1-6  credits
Prerequisite: Sophomore standing
Credit for enrollment in approved study abroad programs.

Psychology Graduate Courses

Seminar in Cognitive Development (DEP 6067) 3 credits
A study of the development of processes involved in thinking and learning.

Parent-Child Relationships (DEP 6609) 3 credits
Course will provide an overview of contemporary theory and research on human parent-child relationships. Fundamentals of developmental psychology will be applied to central issues facing children, parents, and their families.

Evolutionary Developmental Psychology (DEP 6610) 3 credits
Prerequisite: Graduate status or permission of instructor
This seminar acquaints students with the emerging field of evolutionary developmental psychology. Introduction of key concepts, issues, and lines of research. Students are expected to take an active role in discussing and developing the topic under consideration.

Special Topics in Developmental Psychology (DEP 6930) 3 credits
A survey of current research and theory pertaining to selected topics in developmental psychology.

Seminar in Development of Social Cognition (DEP 6931) 3 credits
A critical review of contemporary theory and research on social cognition as it relates to children's social and personality development.

Seminar in Individual Differences in Children's Thinking (DEP 6932) 3 credits
An overview and critical analysis of concepts, theories and empirical findings related to individual differences in children's (and adults') intellectual performance.

Seminar in Human Perception (EXP 6208) 3 credits
A study of the development of theoretical models of perception with an emphasis on human information-processing capacities.

Seminar in Cognition (EXP 6609) 3 credits
A discussion of experimental and theoretical aspects of cognition. Topics include attention, human learning and memory, organization of knowledge, problem solving, and decision making.

Special Topics in Cognition (EXP 6930) 3 credits
A survey of the current literature pertaining to selected topics in cognition.

Directed Independent Study (EXP 6908) 1-3 credits
Grading: S/U

Special Topics in Personality and Social Psychology (PPE 6930) 3 credits
A survey of the current literature pertaining to selected topics in personality and social psychology.

Principles of Neuroscience (PSB 6037) 3 credits
A survey of principles of neuroscience as they relate to behavior. Topics include morphology and connectivity of neural cells, biological potentials, gross structure of the central and peripheral nervous system, and sensory, motor, and higher-order integrative functions.

Seminar in Behavioral Neuroscience (PSB 6058) 3 credits
A subdiscipline of neuroscience, behavioral neuroscience explores how behavior is controlled by the nervous system. Topics such as neural control of waking and arousal, neural control of movement, and the role of dopamine in reinforcement are covered.

Cellular and Molecular Neuroscience  (PSB 6345) 3 credits
This is a graduate course in neuroscience that covers the structure and function of neurons and glial cells including electrophysiology, neurotransmitter systems and synaptic function/plasticity. It is given in conjunction with PSB 6346.

Systems and Integrative Neuroscience  (PSB 6346) 3 credits
This course is for graduate students who have completed PSB 6345 successfully. This course follows PSB 6345 with content on development, neuroanatomy, sensory systems, motor systems and cognition.

Developmental Neurobiology (PSB 6515) 3 credits
Prerequisites: PSY 1012 and PSB 3002
In-depth coverage of the principles and recent advances in the development of the brain and nervous system, including nerve cell migration, axon outgrowth, specificity, plasticity, neurotrophism, nerve cell death, and the influence of experience on the nervous system.

Developmental Neuropsychology (PSB 6516) 3 credits
Prerequisite: Graduate status or permission of instructor
This seminar is designed to introduce students to theories and research on brain maturity and human cognitive development. Key concepts such as brain asymmetry and neuroplasticity are analyzed. Abnormalities resulting from neurological or other biological disruptions are discussed.

Neuroscience Ph.D. Lab Rotation (PSB 6910L) 2 credits
Students admitted to the Neuroscience Ph.D. program complete three laboratory research rotations in Year 1 (fall-spring semesters) with different faculty mentors to gain research experience in the area of neuroscience.  Grading: S/U

Special Topics in Behavioral Neuroscience (PSB 6930) 3 credits
A survey of the current literature pertaining to selected topics in behavioral neuroscience.

Advanced Research in Neuroscience (PSB 7918) 1-9 credits
Prerequisites: Completion of 18 required credits in Year 1 of the Neuroscience Ph.D. program and a GPA of at least 3.0
Focused, relevant research in the student's course of study in the Ph.D. program in Neuroscience. This course requires oversight by the student's dissertation advisor, who can grade the student's performance at the end of the semester. Advanced research work forms the basis for the dissertation proposal.  Grading: S/U

Dissertation (PSB 7980) 1-9 credits
Prerequisite: Admission to doctoral candidacy
Dissertation research leading the Ph.D. degree in Neuroscience.  Grading: S/U

Special Topics (PSY 5930) 3 credits
Selected topics in psychology.

Experimental Design 1 (PSY 6206) 3 credits
An introduction to the design and analysis of experiments in psychology, with special emphasis on analysis of variance models.

Experimental Design 1 Lab (PSY 6206L) 1 credit
The primary goal of this course is to provide students with hands-on experience using SPSS, an advanced statistical software package used in the social and biological sciences. Students gain experience in behavioral data entry, manipulation, analysis, interpretation and visualization.

Experimental Design 2 (PSY 6207) 3 credits
Prerequisite: PSY 6206 or its equivalent
Advanced treatment of experimental designs in psychology, with special emphasis on the analysis of variance in multifactor experiments. It also examines covariance and multiple regression analysis.

Special Topics (PSY 6930) 1-3 credits
Selected topics in psychology are discussed.

Cooperative Education - Psychology (PSY 6949) 1-3 credits

Master's Thesis (PSY 6971) 1-6 credits
Grading: S/U

Advanced Research in Psychology (PSY 7978) 1-9 credits
Prerequisite: Admission to Ph.D. program
Focused, relevant research in the student's course of study in the Ph.D. program in psychology. This course requires oversight by the student's dissertation advisor.  Grading: S/U

Dissertation (PSY 7980) 1-15 credits
Grading: S/U

Advanced Social Behavior (SOP 6079) 3 credits
Advanced theory and methods for studying the dynamics of social systems. Topics include social interaction, the social inhibition of pro- and antisocial behavior, group productivity, and dynamic social impact.

Urban and Regional Planning

Undergraduate Courses /link to graduate courses

Designing the City (URP 2051) 3 credits
This course focuses on the process of urbanization and the social, cultural, political, and economic dynamics behind the complex urbanization process. It explores the historical development of cities, how different patterns of human behavior shape the city space, the role of society in place-making, and planning and governance of cities, including related institutions and organizations. This is a General Education course.

Introduction to Urban Planning and Design (URP 3000) 3 credits
An introduction to and survey of the evolution of cities, urban planning and urban design. Both historical and contemporary perspectives will be employed. Concepts and theories about planning and the relationship between knowledge and action. The political, social and economic forces affecting communities, planning and design.

Planning Methods (URP 4011) 3 credits
Proficiency in application of quantitative and qualitative analytical techniques. Analysis of past and existing conditions and evaluation of alternative policies and programs. Computer applications in planning.

City Structure and Change (URP 4055) 3 credits
This course assists students in understanding the built environment as a dynamic product of social, cultural, political, and economic forces. Students conduct field work to analyze spatial structure and gain experience in graphic communication using maps, drawings, diagrams, and images.

Planning Implementation Strategies (URP 4120) 3 credits
Legal, economic, and political mechanism and strategies for implementing plans, policies and programs to stimulate growth, stem urban decline and protect historic, cultural, and natural resources. Regulatory tools, incentive and disincentive policies, eminent domain, public acquisition, and public spending options used to promote public objectives in planning.

Introduction to Visual Planning Technology (URP 4254) 3 credits
The practice of urban planning now requires that students understand how to use a variety of computer-based applications for creating appropriate visual information linked to other types of data. This course provides an overview of several of these applications: PowerPoint, Excel, Adobe Photoshop, GIS, and 3D visualization.

Advanced Visual Planning Technologies (URP 4255) 3 credits
Prerequisites: URP 4254 with minimum grade of "C"; For B.U.D. and B.U.R.P. students only
The practice of urban planning now requires that students understand how to use a variety of computer-based programs for creating appropriate visuals and graphics. This course explores the computer-based programs to conduct site analysis, create persuasive graphics and improve communications.

RI: Web-Based Applications in Planning (URP 4273) 3 credits
This course focuses on web-based urban and regional planning applications and how they can provide decision support to community-wide land use design, suitability modeling, scenario-based design, comparisons and evaluation of alternatives. This is a research-intensive (RI) course.

Plan Making and Zoning (URP 4343) 3 credits
Prerequisite: URP 3000
Designed to provide students with an understanding of how plans are made and how cities are designed. Emphasis on why planners plan, the different scales and types of plans, how zoning works and how to conduct planning analyses.

Sustainable Cities (URP 4403) 3 credits
The sustainability of cities has gained attention due to the effects of urbanization on the environment, the economy, and social and political justice. This course focuses on planning as a means of making cities more sustainable.

RI: Sustainable Cities (URP 4403) 3 credits
The sustainability of cities has gained attention due to the effects of urbanization on the environment, the economy, and social and political justice. This course focuses on planning as a means of making cities more sustainable. This course is research intensive (RI).

Environmental Planning Methods (URP 4420) 3 credits
Focus on balancing growth and development with protection and preservation for natural resources. Emphasizes planning problems and options in suburban and exurban settings. Concern for air, water and land resources, as well as wildlife habitat.

Planning for Hazards/Disasters (URP 4430) 3 credits
Prerequisite: Juniors and seniors only
Designed to provide students with an understanding of the impact of natural hazards on cities and communities. Emphasis is placed on practical mitigation and recovery strategies as they relate to planning and plan development, vulnerability concepts and methods and the collaboration between organizations, agencies and institutions in efforts toward resilient and sustainable communities.

Health and the Built Environment (URP 4523) 3 credits
The course covers historical/current intersections between urban planning and health, epidemiological and public health principles and methods, and various aspects of health (e.g., exercise, injuries, respiratory health) that are influenced by the built environment and urban planning. Students gain knowledge of Health Impact Assessments and other tools that can be used by urban planners to incorporate considerations of health.

Urban Development Planning Methods (URP 4546) 3 credits
This course focuses on redevelopment, rehabilitation and reuse of existing urbanized areas such as older neighborhoods, downtowns, waterfronts, shopping plazas, and strip commercial developments. Emphasizes community and economic development options to stem decline, stimulate revitalization, promote infill development and gain more efficient use of land and space.

Introduction to Transportation Planning (URP 4710) 3 credits
Introduction to transportation planning issues, planning processes and travel behavior data.

RI: Shared and Automated Transport: Current Trends (URP 4712) 3 credits
This course engages students in the current state of knowledge regarding emerging shared and automated transport modes, drawing from information about current professional practices as well as the research literature. As a seminar-style course, students engage in readings, discussions and presentations to learn about these new modes and grapple with the emerging policy and planning issues surrounding them. This is a research-intensive (RI) course.

Land Use and Transportation Planning (URP 4714) 3 credits
Prerequisite: For B.U.D. and B.U.R.P. students or permission of instructor
Transportation shapes the development of cities. This course examines the relationship between transportation and land use and examines what policies have been successful in creating balanced multimodal transportation systems and integrated land uses. Topics address land use theory and patterns; market forces; regional planning livable communities and smart growth; urban design and new urbanism; mobility, accessibility and multimodal transportation systems; transit-oriented development; and zoning.

Capital Facilities Planning (URP 4730) 3 credits
Prerequisites: URP 3000 and URP 4011
Course familiarizes students with common local and regional capital facilities. Topics include attributes of such facilities, capital improvement plans, and capital improvement budgeting. Students learn how to construct capital improvement plans and programs and how to analyze the fiscal impacts of capital investment. 

Housing Policy and Planning (URP 4741) 3 credits
This course introduces low income housing policies in the United States and the methods to conduct needs assessment for affordable housing. It also addresses other related issues, such as housing bubbles and foreclosures and policy responses in the housing market.

Site Planning (URP 4870) 3 credits
This course covers the basic principles and methods of site planning and the evaluation of site plans.

Urban Design: Theories and Methods (URP 4883) 3 credits
Prerequisite: Upper-level undergraduate standing
Provides fundamental knowledge in terms of urban design theories, basic methods of analysis and modes of graphic representations in urban design. Course emphasizes graphic communication and presentation skills necessary for use in urban design projects.

Directed Independent Study (URP 4905) 1-3 credits
Independent study, research or other directed project to extend and integrate the student's knowledge of issues and applications related to planning practice.

Directed Independent Research (URP 4910) 1-3 credits 
Prerequisite: Permission of instructor
Independent research to extend and integrate the student's knowledge of issues and approaches in the field. 

Directed Independent Research (URP 4916) 0 credits
Prerequisite: For B.U.D. and B.U.R.P. students
This is a supervised research course. Grading: S/U 

Urban Design Studio 1 (URP 4920) 3 credits
Prerequisites: URP 4870 and URP 4883; for B.U.D. students with permission of instructor
Prerequisite or Corequisite: URP 4883 
This studio presents design approaches to study complex small- and mid-scale projects and the network of agents in their transformation. Students learn basic principles of urban design, fundamental skills to integrate multi-scalar design strategies and experiment with various representation methods. 

Urban Design Studio 2 (URP 4922) 3 credits
Prerequisites: For B.U.D. students; permission of instructor; URP 4920 and URP 4255 with minimum grades of "C"
The studio explores urban design as a catalyst of vibrant urban cultural life. Students engage in the conceptualization, planning and design of a district-scale intervention, while learning about urban revitalization from regional and global initiatives. 

RI: Urban Design Capstone (URP 4923) 3 credits
Prerequisites: For B.U.D. students; permission of instructor; URP 4922 with minimum grade of "C"
Students develop an intensive research-based design project reflective of their interests. Emphasis on research design, data gathering methods and translating findings into a written report with design solutions. Studio time is used for lectures, to meet with faculty about their projects and to present progress reports to the class. This is a research-intensive (RI) course. 

RI: Honors Urban Design Capstone (URP 4924) 3 credits
Prerequisites: URP 4922 with minimum grade of "C"; for B.U.D. students or permission of instructor
Students produce a substantive research-based design project that reflects an interdisciplinary approach and meaningful connections focusing on urban design with links among related academic fields. The course focuses on the creation of knowledge pertinent to the field, including leadership, creative and critical thinking, and engagement with the world outside the university. The course involves the refinement of writing, graphics and oral presentation skills to develop a professional-level urban design report. This is a research-intensive (RI) course.

Special Topics (URP 4930) 1-3 credits

Planning  Internship  (URP 4945) 3 credits
Prerequisite: Permission of instructor
This course requires 160 hours of work as an intern in a planning or planning-related agency or company, submission of a report that reflects on that experience and its relationship to material that each student has learned in the course of his or her studies at FAU and a resume critique by the Career Development Center.  Grading: S/U

Planning Abroad (URP 4955) 3 credits
An opportunity to study urban and regional planning practice in another country.

RI: Honors Planning Capstone (URP 4978) 3 credits
Completion of an individual project involving student research and analysis of a problem or issue in planning and design. Refinement of writing and graphics skills or oral presentation. Emphasis on systematic work with regular deadlines and ongoing feedback form the instructor. This is a research-intensive (RI) course.

RI: Planning Capstone (URP 4979) 3 credits
Prerequisites: URP 3000, URP 4011, URP 4870
Completion of an individual project involving student research and analysis of a problem or issue in planning and design, synthetic work resulting in (a) research paper or (b) planning document, film or three-dimensional model. Refinement of writing and graphics skills or oral presentation. This is a research-intensive (RI) course. 

Urban and Regional Planning Graduate Courses

Planning Abroad (URP 5958) 3 credits
An opportunity to study urban and regional planning practice in another country.

History and Theory of Planning (URP 6101) 3 credits
Covers the emergence and evolution of the planning profession, as well as the design and theoretical concepts that underpin contemporary planning practice .

Urban Governance (URP 6115) 3 credits
Provides an overview of the literature on planning and governance. Focuses on the relationship between government and governance, governance in the networked society and participatory governance and conflict management.

Legal Aspects of Planning (URP 6131) 3 credits
An overview of the legal issues in planning and discussion of the regulatory processes that enable planners to shape community growth and development.

Planning Methods  1  (URP 6200) 3 credits
Quantitative reasoning skills in urban and regional planning; development of appropriate computer skills.

Statistics for Urban Planning (URP 6211) 3 credits
This course provides an introduction to statistics with emphasis on applications to practical problems relevant to urban planning.

Regional and Scenario Planning (URP 6237) 3 credits
Discussion of the need for regional planning and the unique governance challenges of regional planning. Theory and application of scenario planning techniques.

Introduction to GIS in Planning (URP 6270) 3 credits
Overview of planning information systems, including basic terminology, tools, and policy issues. Lab fee: $10 per student. To view our full cost of attendance information page, visit http://s7i6.skyupiradio.com/finaid/other/cost-of-attendance/. 

Managing GIS Projects (URP 6272) 3 credits
Prerequisite: URP 6270 or permission of instructor
Organizational and management issues involved in implementing geographic information systems.

GIS Applications in Planning (URP 6277) 3 credits
Prerequisite: URP 6270 or permission of instructor
This course provides urban and regional planning applications of GIS. Included are demonstrations of environmental planning, community and economic development planning, urban design, and land use planning. Students learn to use GIS as a tool for decision-making.

Advanced Plan Making and Zoning (URP 6345) 3 credits
Advanced plan making and zoning enables students to understand why and how plans are made, the different scales and types of plans, how zoning regulations work, and planning and zoning consistency. The course has four parts: (1) provide an overview of plans and plan making followed by adopting zoning regulations to implement those plans; (2) focus on the natural environment when making plans and zoning regulations; (3) focus on the built environment when making plans and zoning regulations; and (4) provide an overview of how planning and zoning works in practice. 

Sustainable Cities (URP 6406) 3 credits
Explores the intellectual foundations and historical development of sustainability as a concept, places it within the larger context of various development theories and looks at how it has influenced real-world practice in planning and public policy.

Environmental Analysis in Planning (URP 6425) 3 credits
Analysis of natural and urban environments, and the application of planning systems.

Environmental Policy and Programs (URP 6429) 3 credits
Policy and analytic perspectives on major issues in environmental planning systems.

Urban Revitalization Strategies (URP 6545) 3 credits
Detailed examination of economic, management, and design tools in local economic development planning.

Economic Development Planning (URP 6549) 3 credits
Policy and analytic perspectives on major issues in community and economic development planning systems.

Transportation Planning (URP 6711) 3 credits
Coverage of transportation planning issues, methods and basic policy analysis approaches. Overview of transportation planning, methods, and emerging planning issues.

Land Use and Transportation Planning (URP 6716) 3 credits
Prerequisite: Permission of instructor
Transportation shapes the development of cities. This course examines the relationship between transportation and land use and examines the policies that have been successful in creating balanced multimodal transportation systems and integrated land uses. Topics address land use theory and patterns; market forces; regional planning, livable communities and smart growth; urban design and new urbanism; mobility, accessibility and multimodal transportation systems;transit-oriented development; and zoning.

Shared and Automated Transport: The Future of Urban Mobility (URP 6719) 3 credits
This course engages students with the current state of knowledge regarding shared and automated transport modes, drawing from information about current professional practices as well as the research literature. As a seminar-style course, students become acquainted with research methods and how they can be used to inform understanding of emerging policy and planning issues surrounding new transportation modes.

Capital Facilities Planning (URP 6732) 3 credits
Planning systems and analytical techniques for urban infrastructure.

Seminar in Housing (URP 6742) 3 credits
Private sector production of housing; public sector regulation of housing. Development regulations and rent control; federal, state, and local government roles in providing housing.

Urban Spatial Structure (URP 6840) 3 credits
Course covers economic theories and descriptive history of the spatial development of metropolitan areas and the role of technology and public policies in shaping urban growth and change. Equity perspectives on urban form and related public policies are also explored.

Urban Development and Design (URP 6841) 3 credits
Overview of urban development processes, including basic terminology, tools, and policy issues.

Site Planning (URP 6873) 3 credits
Principles and basic methods of site planning and site plan evaluation; development design guidelines; site plan approval process.

Urban Design (URP 6881) 3 credits
Elements, concepts, and methods of urban design. Analysis of urban form; methods of implementation.

Urban Design Workshop (URP 6886) 3 credits
Application of physical planning skills to a selected urban design problem; district or project scale.

Directed Independent Study (URP 6905) 1-3 credits
Research on analysis of a problem-oriented planning topic or project.

Planning Workshop (URP 6920)  3 credits
Individual and team approaches to resolving planning problems and issues.

Special Topics (URP 6930)  3 credits
Special topics in urban and regional planning.

Planning Internship  (URP 6945)  3  credits
Supervised work experience in a public planning agency or private organization with planning concerns.  Grading: S/U

Master's Thesis (URP 6971) 3 credits
Prerequisites: 24 credits toward M.U.R.P. degree; M.U.R.P. students only
Master's thesis course for planning students who are interested in research careers and further study at the doctoral level. To be repeated for a total of 6 credits.

Planning Project (URP 6979) 3 credits
Prerequisite: 30 credits of urban planning courses
Synthetic work resulting in: (a) research paper; (b) planning document; or (c) film or three-dimensional model.

Link to Charles E. Schmidt College of Science Programs